y
Basic Information | |
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Species | Arabidopsis lyrata |
Cazyme ID | 890866 |
Family | GH17 |
Protein Properties | Length: 428 Molecular Weight: 45441.2 Isoelectric Point: 9.0445 |
Chromosome | Chromosome/Scaffold: 7 Start: 13779652 End: 13779927 |
Description | F-box family protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH17 | 28 | 348 | 0 |
IGVNYGQIGDNLPSPTDVIPLIKSIGATKVKLYDANPQILKAFSNTGIEFIIGLGNEYLSKMKDPSKALTWIKQNVTPFLPATNITCITIGNEILALNDS SLTSNLLPAMQGVHSALITAGLSDQITVTTAHSLSILKSSFPPSAGEFQPDLLDSLTPILEFHRKTDSPFLINAYPFFAYKGNPKEVPLDFVLFQPNQGI VDPATGFHYDNMLFAQIDAVYSALAAAGYKSLRVEISETGWPSKGDDDEVGATPENAKRYNGNLIKLMMSGKKTKTPLKPNNDLSIYVFALFNENLKPGP MSERNYGLFKPDGTQAYSLGF |
Full Sequence |
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Protein Sequence Length: 428 Download |
MKLTTIHRSS LLFLLSVTVI LPATVTSIGV NYGQIGDNLP SPTDVIPLIK SIGATKVKLY 60 DANPQILKAF SNTGIEFIIG LGNEYLSKMK DPSKALTWIK QNVTPFLPAT NITCITIGNE 120 ILALNDSSLT SNLLPAMQGV HSALITAGLS DQITVTTAHS LSILKSSFPP SAGEFQPDLL 180 DSLTPILEFH RKTDSPFLIN AYPFFAYKGN PKEVPLDFVL FQPNQGIVDP ATGFHYDNML 240 FAQIDAVYSA LAAAGYKSLR VEISETGWPS KGDDDEVGAT PENAKRYNGN LIKLMMSGKK 300 TKTPLKPNND LSIYVFALFN ENLKPGPMSE RNYGLFKPDG TQAYSLGFAL NDVVRGASGG 360 GGGGGGNSSS GGGREKTPVF PVSPVAPDSA STGYLAISAS PVTGRRKGKG AILSMVVVSM 420 LLARHLL* 480 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 3.0e-5 | 99 | 325 | 229 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam00332 | Glyco_hydro_17 | 2.0e-102 | 28 | 348 | 322 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAF31288.1 | 0 | 1 | 405 | 1 | 405 | AC006424_17 CDS [Arabidopsis thaliana] |
RefSeq | NP_174563.2 | 0 | 1 | 427 | 1 | 426 | glycosyl hydrolase family 17 protein [Arabidopsis thaliana] |
RefSeq | XP_002278950.1 | 0 | 34 | 421 | 33 | 399 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002300505.1 | 0 | 14 | 347 | 1 | 332 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002518930.1 | 0 | 7 | 424 | 8 | 402 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3f55_D | 0 | 27 | 349 | 1 | 316 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Complexed With Maltose |
PDB | 3f55_C | 0 | 27 | 349 | 1 | 316 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Complexed With Maltose |
PDB | 3f55_B | 0 | 27 | 349 | 1 | 316 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Complexed With Maltose |
PDB | 3f55_A | 0 | 27 | 349 | 1 | 316 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Complexed With Maltose |
PDB | 3em5_D | 0 | 27 | 349 | 1 | 316 | A Chain A, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev B 2), A Major Allergen From Hevea Brasiliensis |