y
Basic Information | |
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Species | Sorghum bicolor |
Cazyme ID | Sb03g040630.1 |
Family | GH17 |
Protein Properties | Length: 409 Molecular Weight: 43368.4 Isoelectric Point: 5.3524 |
Chromosome | Chromosome/Scaffold: 3 Start: 68207766 End: 68210349 |
Description | Glycosyl hydrolase superfamily protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH17 | 32 | 349 | 0 |
GINYGQIANNLPEPTQVASLLQSMNVNKVKLYDADPRVLTAFANTGVEFIIAVGNENLQTMAASPAAARQWVATNVQPYLPATRITCVTVGNEVFSSNDT SMMASLLPAMKAVYAALGGLGLGSQVTVSSAHSVNVLATSFPPSSGAFREDLAEYIKPILDFHGQSGSPFLINAYPFFAYKASPGSVSLPYVLFEPNPGV RDPNTGLTYDNMLYAQIDAVYAAMKAMGHTDVGVRISETGWPSKGDEDETGATVQNAAAYNGNLMQRIAMNQGTPLKPNVPVDVYVFALFNEDMKPGPAS ERNYGLFYPNGSPVYALN |
Full Sequence |
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Protein Sequence Length: 409 Download |
MGLRVRASSL LLSLALELVV ALVSVSAQQK FGINYGQIAN NLPEPTQVAS LLQSMNVNKV 60 KLYDADPRVL TAFANTGVEF IIAVGNENLQ TMAASPAAAR QWVATNVQPY LPATRITCVT 120 VGNEVFSSND TSMMASLLPA MKAVYAALGG LGLGSQVTVS SAHSVNVLAT SFPPSSGAFR 180 EDLAEYIKPI LDFHGQSGSP FLINAYPFFA YKASPGSVSL PYVLFEPNPG VRDPNTGLTY 240 DNMLYAQIDA VYAAMKAMGH TDVGVRISET GWPSKGDEDE TGATVQNAAA YNGNLMQRIA 300 MNQGTPLKPN VPVDVYVFAL FNEDMKPGPA SERNYGLFYP NGSPVYALNS AGSGGGSSPG 360 GSLNPYYTSM FSSSSRSAVS ATFLTERVIL LLLLQAIVIL RQSYSLYC* 420 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 0.0005 | 32 | 341 | 322 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam00332 | Glyco_hydro_17 | 3.0e-97 | 32 | 346 | 315 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | EEC71847.1 | 0 | 1 | 383 | 1 | 382 | hypothetical protein OsI_04517 [Oryza sativa Indica Group] |
RefSeq | NP_001044874.1 | 0 | 1 | 379 | 1 | 378 | Os01g0860800 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001146374.1 | 0 | 1 | 408 | 1 | 403 | hypothetical protein LOC100279952 [Zea mays] |
RefSeq | NP_001149419.1 | 0 | 1 | 408 | 1 | 406 | glucan endo-1,3-beta-glucosidase 7 [Zea mays] |
RefSeq | XP_002456675.1 | 0 | 1 | 408 | 1 | 408 | hypothetical protein SORBIDRAFT_03g040630 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2cyg_A | 0 | 32 | 348 | 2 | 310 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 1ghs_B | 0 | 32 | 348 | 2 | 304 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 1ghs_A | 0 | 32 | 348 | 2 | 304 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 3f55_D | 0 | 32 | 349 | 3 | 314 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 3f55_C | 0 | 32 | 349 | 3 | 314 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |