Genome Details
Selected Rep_genome_ID: HRGMv2_3194
Total Genomes Found: 1
Total Genomes Found: 1
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Gemmiger
Species
Gemmiger formicilis_A
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| HRGMv2_3194 | 2,925,281 | 97.95% | 2.782% | South Korea | Asia | HRGM |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| HRGMv2_3194_CGC25 | CGCFAM_00041 | Yes | 11 | 4 | |
| HRGMv2_3194_CGC6 | CGCFAM_00078 | Yes | 4 | 3 | galactan |
| HRGMv2_3194_CGC33 | CGCFAM_00098 | Yes | 13 | 7 | |
| HRGMv2_3194_CGC9 | CGCFAM_00100 | Yes | 17 | 2 | |
| HRGMv2_3194_CGC21 | CGCFAM_00102 | Yes | 10 | 3 | |
| HRGMv2_3194_CGC17 | CGCFAM_00122 | Yes | 12 | 5 | |
| HRGMv2_3194_CGC23 | CGCFAM_00233 | Yes | 5 | 2 | |
| HRGMv2_3194_CGC32 | CGCFAM_00259 | Yes | 6 | 3 | |
| HRGMv2_3194_CGC37 | CGCFAM_00342 | Yes | 9 | 3 | |
| HRGMv2_3194_CGC29 | CGCFAM_00462 | Yes | 9 | 4 | |
| HRGMv2_3194_CGC31 | CGCFAM_01647 | Yes | 6 | 2 | |
| HRGMv2_3194_CGC13 | CGCFAM_02189 | Yes | 4 | 1 | |
| HRGMv2_3194_CGC24 | CGCFAM_02238 | Yes | 3 | 1 | |
| HRGMv2_3194_CGC40 | CGCFAM_03285 | Yes | 5 | 3 | |
| HRGMv2_3194_CGC34 | CGCFAM_04013 | Yes | 5 | 2 | |
| HRGMv2_3194_CGC14 | CGCFAM_04020 | Yes | 12 | 5 | |
| HRGMv2_3194_CGC35 | CGCFAM_06206 | Yes | 10 | 1 | |
| HRGMv2_3194_CGC16 | CGCFAM_06522 | Yes | 9 | 2 | |
| HRGMv2_3194_CGC20 | CGCFAM_06842 | Yes | 3 | 1 | |
| HRGMv2_3194_CGC5 | CGCFAM_08316 | Yes | 12 | 3 | |
| HRGMv2_3194_CGC27 | CGCFAM_10327 | Yes | 6 | 1 | |
| HRGMv2_3194_CGC30 | CGCFAM_10328 | Yes | 6 | 1 | |
| HRGMv2_3194_CGC15 | CGCFAM_10333 | Yes | 7 | 3 |
Top CAZyme Families