Cluster: HRGMv2_3194_CGC24
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3194
- CGC Family ID: CGCFAM_02238
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3194_14 | HRGMv2_3194_14_33 | 38204 | 39151 | + | 2.A.4.7.9 |
| peptidase | HRGMv2_3194_14 | HRGMv2_3194_14_34 | 39963 | 41294 | + | C69.001 |
| CAZyme | HRGMv2_3194_14 | HRGMv2_3194_14_35 | 42374 | 43309 | - | GH25 |
Gene ID: HRGMv2_3194_14_33
Type: TC
Location: 38204 - 39151 (+)
Type: TC
Location: 38204 - 39151 (+)
Gene ID: HRGMv2_3194_14_34
Type: peptidase
Location: 39963 - 41294 (+)
Type: peptidase
Location: 39963 - 41294 (+)
Gene ID: HRGMv2_3194_14_35
Type: CAZyme
Location: 42374 - 43309 (-)
Type: CAZyme
Location: 42374 - 43309 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Gemmiger
Species
Gemmiger formicilis_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.