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Cluster: HRGMv2_3194_CGC25

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_3194_15 HRGMv2_3194_15_2 149 1387 + GH73
pfam HRGMv2_3194_15 HRGMv2_3194_15_3 1393 1866 + Phage_holin_4_1
NULL(UNKNOWN) HRGMv2_3194_15 HRGMv2_3194_15_4 2112 2444 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_3194_15 HRGMv2_3194_15_5 2520 3482 - CE8
pfam HRGMv2_3194_15 HRGMv2_3194_15_6 3504 4337 - AP_endonuc_2
CAZyme HRGMv2_3194_15 HRGMv2_3194_15_7 4372 5529 - GH105
CAZyme HRGMv2_3194_15 HRGMv2_3194_15_8 5551 7107 - GH28
TF HRGMv2_3194_15 HRGMv2_3194_15_9 7221 8087 + HTH_AraC | HTH_AraC
TC HRGMv2_3194_15 HRGMv2_3194_15_10 8249 9118 - 3.A.1.1.11
TC HRGMv2_3194_15 HRGMv2_3194_15_11 9139 10047 - 3.A.1.1.11
TC HRGMv2_3194_15 HRGMv2_3194_15_12 10230 11606 - 3.A.1.1.11
Gene ID: HRGMv2_3194_15_2
Type: CAZyme
Location: 149 - 1387 (+)
Gene ID: HRGMv2_3194_15_3
Type: pfam
Location: 1393 - 1866 (+)
Gene ID: HRGMv2_3194_15_4
Type:
Location: 2112 - 2444 (+)
Gene ID: HRGMv2_3194_15_5
Type: CAZyme
Location: 2520 - 3482 (-)
Gene ID: HRGMv2_3194_15_6
Type: pfam
Location: 3504 - 4337 (-)
Gene ID: HRGMv2_3194_15_7
Type: CAZyme
Location: 4372 - 5529 (-)
Gene ID: HRGMv2_3194_15_8
Type: CAZyme
Location: 5551 - 7107 (-)
Gene ID: HRGMv2_3194_15_9
Type: TF
Location: 7221 - 8087 (+)
Gene ID: HRGMv2_3194_15_10
Type: TC
Location: 8249 - 9118 (-)
Gene ID: HRGMv2_3194_15_11
Type: TC
Location: 9139 - 10047 (-)
Gene ID: HRGMv2_3194_15_12
Type: TC
Location: 10230 - 11606 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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