dbCAN Logo

Cluster: HRGMv2_3194_CGC37

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_3194_42 HRGMv2_3194_42_6 6155 8011 - GH20
pfam HRGMv2_3194_42 HRGMv2_3194_42_7 8164 8463 + ABM
TF HRGMv2_3194_42 HRGMv2_3194_42_8 8507 9382 - HTH_AraC | HTH_AraC
TC HRGMv2_3194_42 HRGMv2_3194_42_9 9707 10978 + 3.A.1.1.44
TC HRGMv2_3194_42 HRGMv2_3194_42_10 10991 11875 + 3.A.1.1.25
TC HRGMv2_3194_42 HRGMv2_3194_42_11 11879 12715 + 3.A.1.1.23
CAZyme HRGMv2_3194_42 HRGMv2_3194_42_12 12888 15137 + GH36
STP HRGMv2_3194_42 HRGMv2_3194_42_13 15163 16107 + PfkB
CAZyme HRGMv2_3194_42 HRGMv2_3194_42_14 16125 17984 + GH13_4
Gene ID: HRGMv2_3194_42_6
Type: CAZyme
Location: 6155 - 8011 (-)
Gene ID: HRGMv2_3194_42_7
Type: pfam
Location: 8164 - 8463 (+)
Gene ID: HRGMv2_3194_42_8
Type: TF
Location: 8507 - 9382 (-)
Gene ID: HRGMv2_3194_42_9
Type: TC
Location: 9707 - 10978 (+)
Gene ID: HRGMv2_3194_42_10
Type: TC
Location: 10991 - 11875 (+)
Gene ID: HRGMv2_3194_42_11
Type: TC
Location: 11879 - 12715 (+)
Gene ID: HRGMv2_3194_42_12
Type: CAZyme
Location: 12888 - 15137 (+)
Gene ID: HRGMv2_3194_42_13
Type: STP
Location: 15163 - 16107 (+)
Gene ID: HRGMv2_3194_42_14
Type: CAZyme
Location: 16125 - 17984 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List