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Cluster: HRGMv2_3194_CGC17

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_3194_9 HRGMv2_3194_9_6 5651 8464 - GH2
NULL(UNKNOWN) HRGMv2_3194_9 HRGMv2_3194_9_7 8461 9288 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_3194_9 HRGMv2_3194_9_8 9343 11163 - PL33_1
TF HRGMv2_3194_9 HRGMv2_3194_9_9 11153 12442 - HTH_AraC | HTH_AraC
TC HRGMv2_3194_9 HRGMv2_3194_9_10 12439 14235 - 8.A.59.2.1
STP HRGMv2_3194_9 HRGMv2_3194_9_11 14527 15849 + SBP_bac_1
TC HRGMv2_3194_9 HRGMv2_3194_9_12 15976 16899 + 3.A.1.1.20
TC HRGMv2_3194_9 HRGMv2_3194_9_13 16920 17780 + 3.A.1.1.36
CAZyme HRGMv2_3194_9 HRGMv2_3194_9_14 17883 19043 + GH88
CAZyme HRGMv2_3194_9 HRGMv2_3194_9_15 19075 20871 + GH2
CAZyme HRGMv2_3194_9 HRGMv2_3194_9_16 20897 22621 + GH154
TC HRGMv2_3194_9 HRGMv2_3194_9_17 22766 23554 + 2.A.5.5.2
Gene ID: HRGMv2_3194_9_6
Type: CAZyme
Location: 5651 - 8464 (-)
Gene ID: HRGMv2_3194_9_7
Type:
Location: 8461 - 9288 (-)
Gene ID: HRGMv2_3194_9_8
Type: CAZyme
Location: 9343 - 11163 (-)
Gene ID: HRGMv2_3194_9_9
Type: TF
Location: 11153 - 12442 (-)
Gene ID: HRGMv2_3194_9_10
Type: TC
Location: 12439 - 14235 (-)
Gene ID: HRGMv2_3194_9_11
Type: STP
Location: 14527 - 15849 (+)
Gene ID: HRGMv2_3194_9_12
Type: TC
Location: 15976 - 16899 (+)
Gene ID: HRGMv2_3194_9_13
Type: TC
Location: 16920 - 17780 (+)
Gene ID: HRGMv2_3194_9_14
Type: CAZyme
Location: 17883 - 19043 (+)
Gene ID: HRGMv2_3194_9_15
Type: CAZyme
Location: 19075 - 20871 (+)
Gene ID: HRGMv2_3194_9_16
Type: CAZyme
Location: 20897 - 22621 (+)
Gene ID: HRGMv2_3194_9_17
Type: TC
Location: 22766 - 23554 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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