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Cluster: HRGMv2_3194_CGC35

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3194_32 HRGMv2_3194_32_13 9796 11097 + 2.A.38.4.3
TC HRGMv2_3194_32 HRGMv2_3194_32_14 11117 11794 + 2.A.38.4.4
peptidase HRGMv2_3194_32 HRGMv2_3194_32_15 12291 13895 - M38.UNW
TC HRGMv2_3194_32 HRGMv2_3194_32_16 13906 15093 - 1.I.1.1.3
NULL(UNKNOWN) HRGMv2_3194_32 HRGMv2_3194_32_17 15143 16093 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_3194_32 HRGMv2_3194_32_18 16106 17524 - 2.A.50.2.1
CAZyme HRGMv2_3194_32 HRGMv2_3194_32_19 17685 18269 - CBM13
pfam HRGMv2_3194_32 HRGMv2_3194_32_20 18537 18941 + MGS
pfam HRGMv2_3194_32 HRGMv2_3194_32_21 19060 19710 + YitT_membrane
TC HRGMv2_3194_32 HRGMv2_3194_32_22 19714 20415 - 9.B.143.2.3
Gene ID: HRGMv2_3194_32_13
Type: TC
Location: 9796 - 11097 (+)
Gene ID: HRGMv2_3194_32_14
Type: TC
Location: 11117 - 11794 (+)
Gene ID: HRGMv2_3194_32_15
Type: peptidase
Location: 12291 - 13895 (-)
Gene ID: HRGMv2_3194_32_16
Type: TC
Location: 13906 - 15093 (-)
Gene ID: HRGMv2_3194_32_17
Type:
Location: 15143 - 16093 (-)
Gene ID: HRGMv2_3194_32_18
Type: TC
Location: 16106 - 17524 (-)
Gene ID: HRGMv2_3194_32_19
Type: CAZyme
Location: 17685 - 18269 (-)
Gene ID: HRGMv2_3194_32_20
Type: pfam
Location: 18537 - 18941 (+)
Gene ID: HRGMv2_3194_32_21
Type: pfam
Location: 19060 - 19710 (+)
Gene ID: HRGMv2_3194_32_22
Type: TC
Location: 19714 - 20415 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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