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Cluster: HRGMv2_3194_CGC16

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_3194_8 HRGMv2_3194_8_57 62458 63582 - GT28
pfam HRGMv2_3194_8 HRGMv2_3194_8_58 63570 64187 - G3P_acyltransf
TC HRGMv2_3194_8 HRGMv2_3194_8_59 64275 67883 - 3.A.1.122.2
pfam HRGMv2_3194_8 HRGMv2_3194_8_60 68192 68764 + Flavin_Reduct
TF HRGMv2_3194_8 HRGMv2_3194_8_61 68861 69193 - DUF24
CAZyme HRGMv2_3194_8 HRGMv2_3194_8_62 69387 70868 - GH32
STP HRGMv2_3194_8 HRGMv2_3194_8_63 70981 72669 - SBP_bac_1
TC HRGMv2_3194_8 HRGMv2_3194_8_64 72709 73623 - 3.A.1.1.29
TC HRGMv2_3194_8 HRGMv2_3194_8_65 73638 74612 - 3.A.1.1.10
Gene ID: HRGMv2_3194_8_57
Type: CAZyme
Location: 62458 - 63582 (-)
Gene ID: HRGMv2_3194_8_58
Type: pfam
Location: 63570 - 64187 (-)
Gene ID: HRGMv2_3194_8_59
Type: TC
Location: 64275 - 67883 (-)
Gene ID: HRGMv2_3194_8_60
Type: pfam
Location: 68192 - 68764 (+)
Gene ID: HRGMv2_3194_8_61
Type: TF
Location: 68861 - 69193 (-)
Gene ID: HRGMv2_3194_8_62
Type: CAZyme
Location: 69387 - 70868 (-)
Gene ID: HRGMv2_3194_8_63
Type: STP
Location: 70981 - 72669 (-)
Gene ID: HRGMv2_3194_8_64
Type: TC
Location: 72709 - 73623 (-)
Gene ID: HRGMv2_3194_8_65
Type: TC
Location: 73638 - 74612 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_3194_8_64 vegan > omnivore 1.06379 0.01465

🧭 Explore Read Mapping of CGC

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