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Genome Details

Selected Rep_genome_ID: A129.bin_3
Total Genomes Found: 7
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
→
Phylum
Bacillota_I
→
Class
Bacilli_A
→
Order
Erysipelotrichales
→
Family
Coprobacillaceae
→
Genus
Thomasclavelia
→
Species
Thomasclavelia ramosa
Genomes Table
Genome ID Genome Length Completeness Contamination Country Continent Source
A129.bin_3 3,779,029 100% 0% China(Inner Mongolia) Asia IMGG
CGMR072811 3,500,869 100% 0% China Asia CGMR
KY107_bin.97 3,420,546 100% 0% NA Africa H3AfricaPhase2
SPMP27_bin.28 3,245,955 90.09% 0% Singapore Asia SPMP
SPMP33_bin.68 3,283,148 95.28% 0% Singapore Asia SPMP
SPMP85_bin.54 3,341,984 97.17% 0% Singapore Asia SPMP
SPMP87_bin.31 3,412,852 98.58% 0% Singapore Asia SPMP
Analysis Charts
CGCs
Gene Cluster ID Family Name In Labeled Family Gene Count CAZyme Count Substrate
A129.bin_3_CGC60 CGCFAM_00006 Yes 4 1
A129.bin_3_CGC24 CGCFAM_00007 Yes 10 3
A129.bin_3_CGC36 CGCFAM_00012 Yes 5 1 host glycan/beta-glucan
A129.bin_3_CGC38 CGCFAM_00012 Yes 4 1 host glycan/beta-glucan
A129.bin_3_CGC45 CGCFAM_00020 Yes 8 1 host glycan/beta-glucan
A129.bin_3_CGC47 CGCFAM_00027 Yes 3 2
A129.bin_3_CGC31 CGCFAM_00042 Yes 3 2 beta-glucan
A129.bin_3_CGC44 CGCFAM_00042 Yes 3 1 beta-glucan
A129.bin_3_CGC63 CGCFAM_00042 Yes 5 1 beta-glucan
A129.bin_3_CGC2 CGCFAM_00054 Yes 3 1
A129.bin_3_CGC13 CGCFAM_00057 Yes 4 1
A129.bin_3_CGC18 CGCFAM_00092 Yes 10 1
A129.bin_3_CGC19 CGCFAM_00094 Yes 6 2 beta-mannan/fructan
A129.bin_3_CGC20 CGCFAM_00130 Yes 3 1
A129.bin_3_CGC29 CGCFAM_00131 Yes 4 1
A129.bin_3_CGC28 CGCFAM_00204 Yes 3 1
A129.bin_3_CGC4 CGCFAM_00851 Yes 4 1
A129.bin_3_CGC59 CGCFAM_01533 Yes 4 1
A129.bin_3_CGC39 CGCFAM_01816 Yes 3 1
A129.bin_3_CGC7 CGCFAM_01864 Yes 6 1
A129.bin_3_CGC17 CGCFAM_02350 Yes 6 4
A129.bin_3_CGC46 CGCFAM_02351 Yes 4 1
A129.bin_3_CGC49 CGCFAM_02353 Yes 8 3
A129.bin_3_CGC51 CGCFAM_04136 Yes 5 1
A129.bin_3_CGC30 CGCFAM_04184 Yes 9 4
Top CAZyme Families