Cluster: A129.bin_3_CGC46
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: A129.bin_3
- CGC Family ID: CGCFAM_02351
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | A129_contig_815_corr_2_np12 | A129_contig_815_corr_2_np12_2876 | 2928599 | 2929543 | + | GT2 |
| NULL(UNKNOWN) | A129_contig_815_corr_2_np12 | A129_contig_815_corr_2_np12_2877 | 2929660 | 2930505 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | A129_contig_815_corr_2_np12 | A129_contig_815_corr_2_np12_2878 | 2930744 | 2931061 | + | 4.A.3.2.8 |
| TC | A129_contig_815_corr_2_np12 | A129_contig_815_corr_2_np12_2879 | 2931073 | 2931375 | + | 4.A.3.2.6 |
Gene ID: A129_contig_815_corr_2_np12_2876
Type: CAZyme
Location: 2928599 - 2929543 (+)
Type: CAZyme
Location: 2928599 - 2929543 (+)
Gene ID: A129_contig_815_corr_2_np12_2877
Type:
Location: 2929660 - 2930505 (+)
Type:
Location: 2929660 - 2930505 (+)
Gene ID: A129_contig_815_corr_2_np12_2878
Type: TC
Location: 2930744 - 2931061 (+)
Type: TC
Location: 2930744 - 2931061 (+)
Gene ID: A129_contig_815_corr_2_np12_2879
Type: TC
Location: 2931073 - 2931375 (+)
Type: TC
Location: 2931073 - 2931375 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Coprobacillaceae
Genus
Thomasclavelia
Species
Thomasclavelia ramosa
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.