Cluster: A129.bin_3_CGC47
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 2
- Substrate:
- Genome ID: A129.bin_3
- CGC Family ID: CGCFAM_00027
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | A129_contig_815_corr_2_np12 | A129_contig_815_corr_2_np12_2894 | 2944830 | 2945483 | + | GH1 |
| CAZyme | A129_contig_815_corr_2_np12 | A129_contig_815_corr_2_np12_2895 | 2945499 | 2946299 | + | GH1 |
| TC | A129_contig_815_corr_2_np12 | A129_contig_815_corr_2_np12_2896 | 2946302 | 2948098 | + | 4.A.1.2.11 |
Gene ID: A129_contig_815_corr_2_np12_2894
Type: CAZyme
Location: 2944830 - 2945483 (+)
Type: CAZyme
Location: 2944830 - 2945483 (+)
Gene ID: A129_contig_815_corr_2_np12_2895
Type: CAZyme
Location: 2945499 - 2946299 (+)
Type: CAZyme
Location: 2945499 - 2946299 (+)
Gene ID: A129_contig_815_corr_2_np12_2896
Type: TC
Location: 2946302 - 2948098 (+)
Type: TC
Location: 2946302 - 2948098 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Coprobacillaceae
Genus
Thomasclavelia
Species
Thomasclavelia ramosa
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.