Cluster: A129.bin_3_CGC44
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate: beta-glucan
- Genome ID: A129.bin_3
- CGC Family ID: CGCFAM_00042
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | A129_contig_815_corr_2_np12 | A129_contig_815_corr_2_np12_2734 | 2780249 | 2781601 | + | 4.A.3.2.6 |
| pfam | A129_contig_815_corr_2_np12 | A129_contig_815_corr_2_np12_2735 | 2781619 | 2782497 | + | BcrAD_BadFG |
| CAZyme | A129_contig_815_corr_2_np12 | A129_contig_815_corr_2_np12_2736 | 2782540 | 2783985 | + | GH1 |
Gene ID: A129_contig_815_corr_2_np12_2734
Type: TC
Location: 2780249 - 2781601 (+)
Type: TC
Location: 2780249 - 2781601 (+)
Gene ID: A129_contig_815_corr_2_np12_2735
Type: pfam
Location: 2781619 - 2782497 (+)
Type: pfam
Location: 2781619 - 2782497 (+)
Gene ID: A129_contig_815_corr_2_np12_2736
Type: CAZyme
Location: 2782540 - 2783985 (+)
Type: CAZyme
Location: 2782540 - 2783985 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Coprobacillaceae
Genus
Thomasclavelia
Species
Thomasclavelia ramosa
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.