Cluster: A129.bin_3_CGC38
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate: host glycan/beta-glucan
- Genome ID: A129.bin_3
- CGC Family ID: CGCFAM_00012
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | A129_contig_815_corr_2_np12 | A129_contig_815_corr_2_np12_2452 | 2479437 | 2479712 | - | 4.A.1.2.11 |
| CAZyme | A129_contig_815_corr_2_np12 | A129_contig_815_corr_2_np12_2453 | 2480765 | 2482216 | - | GH1 |
| TC | A129_contig_815_corr_2_np12 | A129_contig_815_corr_2_np12_2454 | 2482219 | 2482560 | - | 4.A.3.2.3 |
| TC | A129_contig_815_corr_2_np12 | A129_contig_815_corr_2_np12_2455 | 2482602 | 2483888 | - | 4.A.3.2.2 |
Gene ID: A129_contig_815_corr_2_np12_2452
Type: TC
Location: 2479437 - 2479712 (-)
Type: TC
Location: 2479437 - 2479712 (-)
Gene ID: A129_contig_815_corr_2_np12_2453
Type: CAZyme
Location: 2480765 - 2482216 (-)
Type: CAZyme
Location: 2480765 - 2482216 (-)
Gene ID: A129_contig_815_corr_2_np12_2454
Type: TC
Location: 2482219 - 2482560 (-)
Type: TC
Location: 2482219 - 2482560 (-)
Gene ID: A129_contig_815_corr_2_np12_2455
Type: TC
Location: 2482602 - 2483888 (-)
Type: TC
Location: 2482602 - 2483888 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Coprobacillaceae
Genus
Thomasclavelia
Species
Thomasclavelia ramosa
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.