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Cluster: A129.bin_3_CGC49

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme A129_contig_815_corr_2_np12 A129_contig_815_corr_2_np12_2946 3000901 3002166 + GH125
TC A129_contig_815_corr_2_np12 A129_contig_815_corr_2_np12_2947 3002313 3003653 + 4.A.3.2.8
CAZyme A129_contig_815_corr_2_np12 A129_contig_815_corr_2_np12_2948 3003631 3006291 + GH38
TF A129_contig_815_corr_2_np12 A129_contig_815_corr_2_np12_2949 3006326 3007093 + HTH_6
CAZyme A129_contig_815_corr_2_np12 A129_contig_815_corr_2_np12_2950 3007111 3009312 + GH3
pfam A129_contig_815_corr_2_np12 A129_contig_815_corr_2_np12_2951 3009481 3011010 + Sulfatase
pfam A129_contig_815_corr_2_np12 A129_contig_815_corr_2_np12_2952 3011150 3012469 + FtsX
TC A129_contig_815_corr_2_np12 A129_contig_815_corr_2_np12_2953 3012457 3013206 + 3.A.1.134.12
Gene ID: A129_contig_815_corr_2_np12_2946
Type: CAZyme
Location: 3000901 - 3002166 (+)
Gene ID: A129_contig_815_corr_2_np12_2947
Type: TC
Location: 3002313 - 3003653 (+)
Gene ID: A129_contig_815_corr_2_np12_2948
Type: CAZyme
Location: 3003631 - 3006291 (+)
Gene ID: A129_contig_815_corr_2_np12_2949
Type: TF
Location: 3006326 - 3007093 (+)
Gene ID: A129_contig_815_corr_2_np12_2950
Type: CAZyme
Location: 3007111 - 3009312 (+)
Gene ID: A129_contig_815_corr_2_np12_2951
Type: pfam
Location: 3009481 - 3011010 (+)
Gene ID: A129_contig_815_corr_2_np12_2952
Type: pfam
Location: 3011150 - 3012469 (+)
Gene ID: A129_contig_815_corr_2_np12_2953
Type: TC
Location: 3012457 - 3013206 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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