Cluster: A129.bin_3_CGC59
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: A129.bin_3
- CGC Family ID: CGCFAM_01533
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | A129_contig_815_corr_2_np12 | A129_contig_815_corr_2_np12_3455 | 3518134 | 3519126 | + | GT2 |
| pfam | A129_contig_815_corr_2_np12 | A129_contig_815_corr_2_np12_3456 | 3519483 | 3520025 | + | Hexapep |
| pfam | A129_contig_815_corr_2_np12 | A129_contig_815_corr_2_np12_3457 | 3519997 | 3520599 | + | PAP2 | PAP2_3 |
| TC | A129_contig_815_corr_2_np12 | A129_contig_815_corr_2_np12_3458 | 3520821 | 3521918 | + | 2.A.86.1.11 |
Gene ID: A129_contig_815_corr_2_np12_3455
Type: CAZyme
Location: 3518134 - 3519126 (+)
Type: CAZyme
Location: 3518134 - 3519126 (+)
Gene ID: A129_contig_815_corr_2_np12_3456
Type: pfam
Location: 3519483 - 3520025 (+)
Type: pfam
Location: 3519483 - 3520025 (+)
Gene ID: A129_contig_815_corr_2_np12_3457
Type: pfam
Location: 3519997 - 3520599 (+)
Type: pfam
Location: 3519997 - 3520599 (+)
Gene ID: A129_contig_815_corr_2_np12_3458
Type: TC
Location: 3520821 - 3521918 (+)
Type: TC
Location: 3520821 - 3521918 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Coprobacillaceae
Genus
Thomasclavelia
Species
Thomasclavelia ramosa
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.