Cluster: A129.bin_3_CGC2
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: A129.bin_3
- CGC Family ID: CGCFAM_00054
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | A129_contig_815_corr_2_np12 | A129_contig_815_corr_2_np12_145 | 143795 | 144262 | + | 4.A.1.1.6 |
| TC | A129_contig_815_corr_2_np12 | A129_contig_815_corr_2_np12_146 | 144267 | 145718 | + | 2.A.2.1.1 |
| CAZyme | A129_contig_815_corr_2_np12 | A129_contig_815_corr_2_np12_147 | 145708 | 147936 | + | GH36 |
Gene ID: A129_contig_815_corr_2_np12_145
Type: TC
Location: 143795 - 144262 (+)
Type: TC
Location: 143795 - 144262 (+)
Gene ID: A129_contig_815_corr_2_np12_146
Type: TC
Location: 144267 - 145718 (+)
Type: TC
Location: 144267 - 145718 (+)
Gene ID: A129_contig_815_corr_2_np12_147
Type: CAZyme
Location: 145708 - 147936 (+)
Type: CAZyme
Location: 145708 - 147936 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Coprobacillaceae
Genus
Thomasclavelia
Species
Thomasclavelia ramosa
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.