Cluster: A129.bin_3_CGC29
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: A129.bin_3
- CGC Family ID: CGCFAM_00131
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | A129_contig_815_corr_2_np12 | A129_contig_815_corr_2_np12_1880 | 1869142 | 1869630 | - | 4.A.1.2.6 |
| CAZyme | A129_contig_815_corr_2_np12 | A129_contig_815_corr_2_np12_1881 | 1869632 | 1870963 | - | GH4 |
| NULL(UNKNOWN) | A129_contig_815_corr_2_np12 | A129_contig_815_corr_2_np12_1882 | 1870983 | 1871474 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | A129_contig_815_corr_2_np12 | A129_contig_815_corr_2_np12_1883 | 1871500 | 1873059 | - | 4.A.1.1.8 |
Gene ID: A129_contig_815_corr_2_np12_1880
Type: TC
Location: 1869142 - 1869630 (-)
Type: TC
Location: 1869142 - 1869630 (-)
Gene ID: A129_contig_815_corr_2_np12_1881
Type: CAZyme
Location: 1869632 - 1870963 (-)
Type: CAZyme
Location: 1869632 - 1870963 (-)
Gene ID: A129_contig_815_corr_2_np12_1882
Type:
Location: 1870983 - 1871474 (-)
Type:
Location: 1870983 - 1871474 (-)
Gene ID: A129_contig_815_corr_2_np12_1883
Type: TC
Location: 1871500 - 1873059 (-)
Type: TC
Location: 1871500 - 1873059 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Coprobacillaceae
Genus
Thomasclavelia
Species
Thomasclavelia ramosa
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.