Cluster: A129.bin_3_CGC39
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: A129.bin_3
- CGC Family ID: CGCFAM_01816
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | A129_contig_815_corr_2_np12 | A129_contig_815_corr_2_np12_2459 | 2487161 | 2487730 | - | GH4 |
| TF | A129_contig_815_corr_2_np12 | A129_contig_815_corr_2_np12_2460 | 2488052 | 2488810 | - | HTH_6 |
| TC | A129_contig_815_corr_2_np12 | A129_contig_815_corr_2_np12_2461 | 2488976 | 2490244 | + | 2.A.40.1.1 |
Gene ID: A129_contig_815_corr_2_np12_2459
Type: CAZyme
Location: 2487161 - 2487730 (-)
Type: CAZyme
Location: 2487161 - 2487730 (-)
Gene ID: A129_contig_815_corr_2_np12_2460
Type: TF
Location: 2488052 - 2488810 (-)
Type: TF
Location: 2488052 - 2488810 (-)
Gene ID: A129_contig_815_corr_2_np12_2461
Type: TC
Location: 2488976 - 2490244 (+)
Type: TC
Location: 2488976 - 2490244 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Coprobacillaceae
Genus
Thomasclavelia
Species
Thomasclavelia ramosa
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.