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Cluster: A129.bin_3_CGC19

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC A129_contig_815_corr_2_np12 A129_contig_815_corr_2_np12_1593 1559866 1560831 - 3.A.1.2.14
CAZyme A129_contig_815_corr_2_np12 A129_contig_815_corr_2_np12_1594 1560963 1562363 - GH32
TC A129_contig_815_corr_2_np12 A129_contig_815_corr_2_np12_1595 1562375 1564270 - 4.A.1.2.12
TF A129_contig_815_corr_2_np12 A129_contig_815_corr_2_np12_1596 1564414 1565412 - LacI
pfam A129_contig_815_corr_2_np12 A129_contig_815_corr_2_np12_1597 1565591 1566811 - DUF218
CAZyme A129_contig_815_corr_2_np12 A129_contig_815_corr_2_np12_1598 1567319 1568797 - GH1
Gene ID: A129_contig_815_corr_2_np12_1593
Type: TC
Location: 1559866 - 1560831 (-)
Gene ID: A129_contig_815_corr_2_np12_1594
Type: CAZyme
Location: 1560963 - 1562363 (-)
Gene ID: A129_contig_815_corr_2_np12_1595
Type: TC
Location: 1562375 - 1564270 (-)
Gene ID: A129_contig_815_corr_2_np12_1596
Type: TF
Location: 1564414 - 1565412 (-)
Gene ID: A129_contig_815_corr_2_np12_1597
Type: pfam
Location: 1565591 - 1566811 (-)
Gene ID: A129_contig_815_corr_2_np12_1598
Type: CAZyme
Location: 1567319 - 1568797 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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