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Genome Details

Selected Rep_genome_ID: ShaoY_2019_ERR3406195_bin.12
Total Genomes Found: 2
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Oscillospirales
→
Family
Ruminococcaceae
→
Genus
Gemmiger
→
Species
Gemmiger sp934502625
Genomes Table
Genome ID Genome Length Completeness Contamination Country Continent Source
ShaoY_2019_ERR3406195_bin.12 2,992,715 97.27% 0% UK Europe ELGG
SW023_57 2,454,844 95.24% 0% NA Africa H3AfricaPhase2
Analysis Charts
CGCs
Gene Cluster ID Family Name In Labeled Family Gene Count CAZyme Count Substrate
ShaoY_2019_ERR3406195_bin.12_CGC13 CGCFAM_00005 Yes 7 2
ShaoY_2019_ERR3406195_bin.12_CGC34 CGCFAM_00006 Yes 6 4
ShaoY_2019_ERR3406195_bin.12_CGC12 CGCFAM_00047 Yes 6 2
ShaoY_2019_ERR3406195_bin.12_CGC22 CGCFAM_00091 Yes 7 3
ShaoY_2019_ERR3406195_bin.12_CGC15 CGCFAM_00157 Yes 4 1
ShaoY_2019_ERR3406195_bin.12_CGC35 CGCFAM_00271 Yes 3 2
ShaoY_2019_ERR3406195_bin.12_CGC4 CGCFAM_00295 Yes 3 1
ShaoY_2019_ERR3406195_bin.12_CGC16 CGCFAM_00312 Yes 12 2 host glycan
ShaoY_2019_ERR3406195_bin.12_CGC19 CGCFAM_00424 Yes 4 1
ShaoY_2019_ERR3406195_bin.12_CGC17 CGCFAM_00678 Yes 4 1
ShaoY_2019_ERR3406195_bin.12_CGC18 CGCFAM_00764 Yes 6 1
ShaoY_2019_ERR3406195_bin.12_CGC26 CGCFAM_00847 Yes 6 2
ShaoY_2019_ERR3406195_bin.12_CGC44 CGCFAM_00871 Yes 11 5
ShaoY_2019_ERR3406195_bin.12_CGC28 CGCFAM_00903 Yes 6 1
ShaoY_2019_ERR3406195_bin.12_CGC38 CGCFAM_00970 Yes 5 4
ShaoY_2019_ERR3406195_bin.12_CGC11 CGCFAM_01316 Yes 9 3
ShaoY_2019_ERR3406195_bin.12_CGC43 CGCFAM_01506 Yes 17 10
ShaoY_2019_ERR3406195_bin.12_CGC42 CGCFAM_03430 Yes 4 1
ShaoY_2019_ERR3406195_bin.12_CGC41 CGCFAM_03930 Yes 7 1
ShaoY_2019_ERR3406195_bin.12_CGC20 CGCFAM_04434 Yes 4 1
ShaoY_2019_ERR3406195_bin.12_CGC31 CGCFAM_10329 Yes 3 2
Top CAZyme Families