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Cluster: ShaoY_2019_ERR3406195_bin.12_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme ShaoY_2019_ERR3406195_bin.12_k141_5178 ShaoY_2019_ERR3406195_bin.12_k141_5178_46 46718 47746 - GT4
CAZyme ShaoY_2019_ERR3406195_bin.12_k141_5178 ShaoY_2019_ERR3406195_bin.12_k141_5178_47 47940 48701 - GT2
TC ShaoY_2019_ERR3406195_bin.12_k141_5178 ShaoY_2019_ERR3406195_bin.12_k141_5178_48 49455 50819 - 9.B.18.1.3
NULL(UNKNOWN) ShaoY_2019_ERR3406195_bin.12_k141_5178 ShaoY_2019_ERR3406195_bin.12_k141_5178_49 51089 51949 + NULL(UNKNOWN)
[View Structural Homologs]
pfam ShaoY_2019_ERR3406195_bin.12_k141_5178 ShaoY_2019_ERR3406195_bin.12_k141_5178_50 51946 53004 + DUF6077
TC ShaoY_2019_ERR3406195_bin.12_k141_5178 ShaoY_2019_ERR3406195_bin.12_k141_5178_51 53004 53819 + 8.A.3.2.3
TC ShaoY_2019_ERR3406195_bin.12_k141_5178 ShaoY_2019_ERR3406195_bin.12_k141_5178_52 53812 54456 + 8.A.3.3.2
Gene ID: ShaoY_2019_ERR3406195_bin.12_k141_5178_46
Type: CAZyme
Location: 46718 - 47746 (-)
Gene ID: ShaoY_2019_ERR3406195_bin.12_k141_5178_47
Type: CAZyme
Location: 47940 - 48701 (-)
Gene ID: ShaoY_2019_ERR3406195_bin.12_k141_5178_48
Type: TC
Location: 49455 - 50819 (-)
Gene ID: ShaoY_2019_ERR3406195_bin.12_k141_5178_49
Type:
Location: 51089 - 51949 (+)
Gene ID: ShaoY_2019_ERR3406195_bin.12_k141_5178_50
Type: pfam
Location: 51946 - 53004 (+)
Gene ID: ShaoY_2019_ERR3406195_bin.12_k141_5178_51
Type: TC
Location: 53004 - 53819 (+)
Gene ID: ShaoY_2019_ERR3406195_bin.12_k141_5178_52
Type: TC
Location: 53812 - 54456 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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