Cluster: ShaoY_2019_ERR3406195_bin.12_CGC4
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: ShaoY_2019_ERR3406195_bin.12
- CGC Family ID: CGCFAM_00295
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | ShaoY_2019_ERR3406195_bin.12_k141_2919 | ShaoY_2019_ERR3406195_bin.12_k141_2919_53 | 57313 | 58248 | + | 3.A.1.1.11 |
| TC | ShaoY_2019_ERR3406195_bin.12_k141_2919 | ShaoY_2019_ERR3406195_bin.12_k141_2919_54 | 58250 | 59095 | + | 3.A.1.1.36 |
| CAZyme | ShaoY_2019_ERR3406195_bin.12_k141_2919 | ShaoY_2019_ERR3406195_bin.12_k141_2919_55 | 59110 | 61593 | + | GH2 |
Gene ID: ShaoY_2019_ERR3406195_bin.12_k141_2919_53
Type: TC
Location: 57313 - 58248 (+)
Type: TC
Location: 57313 - 58248 (+)
Gene ID: ShaoY_2019_ERR3406195_bin.12_k141_2919_54
Type: TC
Location: 58250 - 59095 (+)
Type: TC
Location: 58250 - 59095 (+)
Gene ID: ShaoY_2019_ERR3406195_bin.12_k141_2919_55
Type: CAZyme
Location: 59110 - 61593 (+)
Type: CAZyme
Location: 59110 - 61593 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Gemmiger
Species
Gemmiger sp934502625
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.