Cluster: ShaoY_2019_ERR3406195_bin.12_CGC15
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: ShaoY_2019_ERR3406195_bin.12
- CGC Family ID: CGCFAM_00157
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | ShaoY_2019_ERR3406195_bin.12_k141_5178 | ShaoY_2019_ERR3406195_bin.12_k141_5178_69 | 80841 | 82142 | - | 2.A.56.1.5 |
| TC | ShaoY_2019_ERR3406195_bin.12_k141_5178 | ShaoY_2019_ERR3406195_bin.12_k141_5178_70 | 82139 | 82648 | - | 2.A.56.1.5 |
| TC | ShaoY_2019_ERR3406195_bin.12_k141_5178 | ShaoY_2019_ERR3406195_bin.12_k141_5178_71 | 82652 | 83686 | - | 2.A.56.1.2 |
| CAZyme | ShaoY_2019_ERR3406195_bin.12_k141_5178 | ShaoY_2019_ERR3406195_bin.12_k141_5178_72 | 83759 | 86284 | - | GH31_2 |
Gene ID: ShaoY_2019_ERR3406195_bin.12_k141_5178_69
Type: TC
Location: 80841 - 82142 (-)
Type: TC
Location: 80841 - 82142 (-)
Gene ID: ShaoY_2019_ERR3406195_bin.12_k141_5178_70
Type: TC
Location: 82139 - 82648 (-)
Type: TC
Location: 82139 - 82648 (-)
Gene ID: ShaoY_2019_ERR3406195_bin.12_k141_5178_71
Type: TC
Location: 82652 - 83686 (-)
Type: TC
Location: 82652 - 83686 (-)
Gene ID: ShaoY_2019_ERR3406195_bin.12_k141_5178_72
Type: CAZyme
Location: 83759 - 86284 (-)
Type: CAZyme
Location: 83759 - 86284 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Gemmiger
Species
Gemmiger sp934502625
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.