dbCAN Logo

Cluster: ShaoY_2019_ERR3406195_bin.12_CGC28

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC ShaoY_2019_ERR3406195_bin.12_k141_8704 ShaoY_2019_ERR3406195_bin.12_k141_8704_49 60878 62608 + 9.B.33.1.1
STP ShaoY_2019_ERR3406195_bin.12_k141_8704 ShaoY_2019_ERR3406195_bin.12_k141_8704_50 62755 64056 + SBP_bac_1
TC ShaoY_2019_ERR3406195_bin.12_k141_8704 ShaoY_2019_ERR3406195_bin.12_k141_8704_51 64132 65037 + 3.A.1.1.42
TC ShaoY_2019_ERR3406195_bin.12_k141_8704 ShaoY_2019_ERR3406195_bin.12_k141_8704_52 65034 65873 + 3.A.1.1.45
STP ShaoY_2019_ERR3406195_bin.12_k141_8704 ShaoY_2019_ERR3406195_bin.12_k141_8704_53 65880 66734 + PIG-L
CAZyme ShaoY_2019_ERR3406195_bin.12_k141_8704 ShaoY_2019_ERR3406195_bin.12_k141_8704_54 66747 69086 + GH65
Gene ID: ShaoY_2019_ERR3406195_bin.12_k141_8704_49
Type: TC
Location: 60878 - 62608 (+)
Gene ID: ShaoY_2019_ERR3406195_bin.12_k141_8704_50
Type: STP
Location: 62755 - 64056 (+)
Gene ID: ShaoY_2019_ERR3406195_bin.12_k141_8704_51
Type: TC
Location: 64132 - 65037 (+)
Gene ID: ShaoY_2019_ERR3406195_bin.12_k141_8704_52
Type: TC
Location: 65034 - 65873 (+)
Gene ID: ShaoY_2019_ERR3406195_bin.12_k141_8704_53
Type: STP
Location: 65880 - 66734 (+)
Gene ID: ShaoY_2019_ERR3406195_bin.12_k141_8704_54
Type: CAZyme
Location: 66747 - 69086 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List