Cluster: ShaoY_2019_ERR3406195_bin.12_CGC19
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: ShaoY_2019_ERR3406195_bin.12
- CGC Family ID: CGCFAM_00424
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | ShaoY_2019_ERR3406195_bin.12_k141_6204 | ShaoY_2019_ERR3406195_bin.12_k141_6204_110 | 128378 | 128725 | - | 2.A.7.33.5 |
| NULL(UNKNOWN) | ShaoY_2019_ERR3406195_bin.12_k141_6204 | ShaoY_2019_ERR3406195_bin.12_k141_6204_111 | 128722 | 129090 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | ShaoY_2019_ERR3406195_bin.12_k141_6204 | ShaoY_2019_ERR3406195_bin.12_k141_6204_112 | 129112 | 130224 | - | Acyl_transf_3 |
| CAZyme | ShaoY_2019_ERR3406195_bin.12_k141_6204 | ShaoY_2019_ERR3406195_bin.12_k141_6204_113 | 130214 | 131146 | - | GT2 |
Gene ID: ShaoY_2019_ERR3406195_bin.12_k141_6204_110
Type: TC
Location: 128378 - 128725 (-)
Type: TC
Location: 128378 - 128725 (-)
Gene ID: ShaoY_2019_ERR3406195_bin.12_k141_6204_111
Type:
Location: 128722 - 129090 (-)
Type:
Location: 128722 - 129090 (-)
Gene ID: ShaoY_2019_ERR3406195_bin.12_k141_6204_112
Type: pfam
Location: 129112 - 130224 (-)
Type: pfam
Location: 129112 - 130224 (-)
Gene ID: ShaoY_2019_ERR3406195_bin.12_k141_6204_113
Type: CAZyme
Location: 130214 - 131146 (-)
Type: CAZyme
Location: 130214 - 131146 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Gemmiger
Species
Gemmiger sp934502625
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.