Cluster: ShaoY_2019_ERR3406195_bin.12_CGC17
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: ShaoY_2019_ERR3406195_bin.12
- CGC Family ID: CGCFAM_00678
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | ShaoY_2019_ERR3406195_bin.12_k141_5976 | ShaoY_2019_ERR3406195_bin.12_k141_5976_1 | 547 | 1920 | + | 2.A.66.1.32 |
| TC | ShaoY_2019_ERR3406195_bin.12_k141_5976 | ShaoY_2019_ERR3406195_bin.12_k141_5976_2 | 2376 | 3851 | + | 4.A.1.1.7 |
| sulfatase | ShaoY_2019_ERR3406195_bin.12_k141_5976 | ShaoY_2019_ERR3406195_bin.12_k141_5976_3 | 4059 | 4787 | + | S1_9 |
| CAZyme | ShaoY_2019_ERR3406195_bin.12_k141_5976 | ShaoY_2019_ERR3406195_bin.12_k141_5976_4 | 4807 | 5934 | + | CE9 |
Gene ID: ShaoY_2019_ERR3406195_bin.12_k141_5976_1
Type: TC
Location: 547 - 1920 (+)
Type: TC
Location: 547 - 1920 (+)
Gene ID: ShaoY_2019_ERR3406195_bin.12_k141_5976_2
Type: TC
Location: 2376 - 3851 (+)
Type: TC
Location: 2376 - 3851 (+)
Gene ID: ShaoY_2019_ERR3406195_bin.12_k141_5976_3
Type: sulfatase
Location: 4059 - 4787 (+)
Type: sulfatase
Location: 4059 - 4787 (+)
Gene ID: ShaoY_2019_ERR3406195_bin.12_k141_5976_4
Type: CAZyme
Location: 4807 - 5934 (+)
Type: CAZyme
Location: 4807 - 5934 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Gemmiger
Species
Gemmiger sp934502625
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.