Cluster: ShaoY_2019_ERR3406195_bin.12_CGC35
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 2
- Substrate:
- Genome ID: ShaoY_2019_ERR3406195_bin.12
- CGC Family ID: CGCFAM_00271
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | ShaoY_2019_ERR3406195_bin.12_k141_14234 | ShaoY_2019_ERR3406195_bin.12_k141_14234_65 | 73550 | 74689 | - | 3.B.1.1.1 |
| CAZyme | ShaoY_2019_ERR3406195_bin.12_k141_14234 | ShaoY_2019_ERR3406195_bin.12_k141_14234_66 | 74922 | 76772 | - | GH13_39 |
| CAZyme | ShaoY_2019_ERR3406195_bin.12_k141_14234 | ShaoY_2019_ERR3406195_bin.12_k141_14234_67 | 76990 | 79392 | - | GT35 |
Gene ID: ShaoY_2019_ERR3406195_bin.12_k141_14234_65
Type: TC
Location: 73550 - 74689 (-)
Type: TC
Location: 73550 - 74689 (-)
Gene ID: ShaoY_2019_ERR3406195_bin.12_k141_14234_66
Type: CAZyme
Location: 74922 - 76772 (-)
Type: CAZyme
Location: 74922 - 76772 (-)
Gene ID: ShaoY_2019_ERR3406195_bin.12_k141_14234_67
Type: CAZyme
Location: 76990 - 79392 (-)
Type: CAZyme
Location: 76990 - 79392 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Gemmiger
Species
Gemmiger sp934502625
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.