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Genome Details

Selected Rep_genome_ID: HRGMv2_2087
Total Genomes Found: 55
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Lachnospirales
→
Family
Lachnospiraceae
→
Genus
Agathobacter
→
Species
Agathobacter faecis
Genomes Table
Genome ID Genome Length Completeness Contamination Country Continent Source
A134.CMAG_5 3,453,745 99.21% 1.69% China(Inner Mongolia) Asia IMGG
CGMR089522 2,820,781 98.31% 0.79% China Asia CGMR
GCA_021616915.1_ASM2161691v1_genomic 2,468,781 92.17% 2.29% NA Africa H3AfricaPhase1
GCA_021623445.1_ASM2162344v1_genomic 3,156,489 98.97% 2.08% NA Africa H3AfricaPhase1
GCA_021637285.1_ASM2163728v1_genomic 2,619,904 94.81% 2.83% NA Africa H3AfricaPhase1
HRGMv2_2087 2,963,189 98.73% 0.724% China Asia HRGM
KY078_bin.21_sub 2,993,946 99.21% 1.28% NA Africa H3AfricaPhase2
Rep_2170 3,350,626 99.215% 1.93237% NA NA WIS
SPMP04_bin.118 2,919,359 95.41% 2.73% Singapore Asia SPMP
SPMP05_bin.133 2,782,081 91.96% 1.76% Singapore Asia SPMP
SPMP08_bin.77 2,932,111 96.52% 3.63% Singapore Asia SPMP
SPMP101_bin.43 2,594,968 90.68% 2.17% Singapore Asia SPMP
SPMP105_bin.32 2,781,530 97.26% 2.66% Singapore Asia SPMP
SPMP106_bin.37 3,122,119 97.11% 1.69% Singapore Asia SPMP
SPMP108_bin.51 3,020,791 97.71% 4.91% Singapore Asia SPMP
SPMP12_bin.26 3,390,582 99.21% 3.69% Singapore Asia SPMP
SPMP16_bin.5 3,120,388 98.25% 1.76% Singapore Asia SPMP
SPMP18_bin.146 3,273,755 97.64% 3.93% Singapore Asia SPMP
SPMP24_bin.63 2,832,049 95.81% 1.69% Singapore Asia SPMP
SPMP25_bin.29 3,081,334 97.99% 1.69% Singapore Asia SPMP
SPMP26_bin.85 3,037,604 98.64% 1.69% Singapore Asia SPMP
SPMP29_bin.5 2,840,347 97.42% 2% Singapore Asia SPMP
SPMP31_bin.158 2,765,557 93.68% 1.76% Singapore Asia SPMP
SPMP34_bin.9 3,101,575 98.68% 2.73% Singapore Asia SPMP
SPMP35_bin.78 3,160,107 96.99% 1.52% Singapore Asia SPMP
SPMP37_bin.104 2,855,432 94.4% 0.97% Singapore Asia SPMP
SPMP38_bin.35 2,968,484 95.61% 1.93% Singapore Asia SPMP
SPMP39_bin.91 3,100,371 99.05% 3.14% Singapore Asia SPMP
SPMP42_bin.20 3,141,360 98.73% 1.52% Singapore Asia SPMP
SPMP43_bin.115 2,849,375 96.97% 1.76% Singapore Asia SPMP
SPMP44_bin.43 3,077,637 98.16% 2.24% Singapore Asia SPMP
SPMP45_bin.4 3,043,935 99.46% 1.52% Singapore Asia SPMP
SPMP49_bin.2 2,821,652 97.51% 1.92% Singapore Asia SPMP
SPMP54_bin.98 3,062,193 97.57% 2.66% Singapore Asia SPMP
SPMP59_bin.46 3,530,622 97.67% 1.28% Singapore Asia SPMP
SPMP60_bin.71 2,734,140 91.35% 2% Singapore Asia SPMP
SPMP63_bin.67 3,386,833 96.12% 2.42% Singapore Asia SPMP
SPMP64_bin.38 3,176,502 93.96% 2.29% Singapore Asia SPMP
SPMP67_bin.33 2,932,244 91.3% 1.69% Singapore Asia SPMP
SPMP68_bin.46 2,791,355 96.28% 1.52% Singapore Asia SPMP
SPMP70_bin.25 3,276,258 96.52% 2.17% Singapore Asia SPMP
SPMP71_bin.3 3,279,337 97.73% 0.72% Singapore Asia SPMP
SPMP74_bin.108 2,796,512 96.22% 1.21% Singapore Asia SPMP
SPMP76_bin.87 2,919,749 94.38% 3.86% Singapore Asia SPMP
SPMP77_bin.41 3,104,774 96.93% 2.33% Singapore Asia SPMP
SPMP79_bin.60 3,126,848 93.93% 2.4% Singapore Asia SPMP
SPMP81_bin.105 3,349,221 97.94% 3.21% Singapore Asia SPMP
SPMP82_bin.41 3,014,984 97.14% 2.95% Singapore Asia SPMP
SPMP83_bin.74 3,114,730 95.83% 2.22% Singapore Asia SPMP
SPMP89_bin.14 3,425,314 99.21% 1.76% Singapore Asia SPMP
SPMP91_bin.5 3,149,648 98.31% 1.76% Singapore Asia SPMP
SPMP93_bin.92 2,811,030 97.77% 1.69% Singapore Asia SPMP
SPMP94_bin.125 3,599,513 96.32% 3.86% Singapore Asia SPMP
SPMP97_bin.117 2,607,889 93% 1.04% Singapore Asia SPMP
SPMP98_bin.47 2,788,722 94.81% 2.16% Singapore Asia SPMP
Analysis Charts
CGCs
Gene Cluster ID Family Name In Labeled Family Gene Count CAZyme Count Substrate
HRGMv2_2087_CGC27 CGCFAM_00047 Yes 5 1
HRGMv2_2087_CGC22 CGCFAM_00054 Yes 6 2
HRGMv2_2087_CGC14 CGCFAM_00078 Yes 4 1 galactan
HRGMv2_2087_CGC11 CGCFAM_00117 Yes 6 2 alpha-glucan
HRGMv2_2087_CGC1 CGCFAM_00133 Yes 9 3
HRGMv2_2087_CGC8 CGCFAM_00224 Yes 14 7
HRGMv2_2087_CGC19 CGCFAM_00270 Yes 9 1
HRGMv2_2087_CGC6 CGCFAM_00450 Yes 5 1
HRGMv2_2087_CGC17 CGCFAM_00481 Yes 4 1 fructan
HRGMv2_2087_CGC5 CGCFAM_00500 Yes 8 1
HRGMv2_2087_CGC33 CGCFAM_00569 Yes 11 4
HRGMv2_2087_CGC31 CGCFAM_00596 Yes 3 1
HRGMv2_2087_CGC24 CGCFAM_00710 Yes 13 3
HRGMv2_2087_CGC28 CGCFAM_00843 Yes 8 3
HRGMv2_2087_CGC18 CGCFAM_00938 Yes 4 1 galactan
HRGMv2_2087_CGC16 CGCFAM_01550 Yes 11 3
HRGMv2_2087_CGC25 CGCFAM_01621 Yes 3 2
HRGMv2_2087_CGC29 CGCFAM_02586 Yes 12 4
HRGMv2_2087_CGC12 CGCFAM_03384 Yes 5 1
HRGMv2_2087_CGC30 CGCFAM_04464 Yes 11 2
HRGMv2_2087_CGC35 CGCFAM_06667 Yes 9 3
HRGMv2_2087_CGC23 CGCFAM_06986 Yes 17 9
HRGMv2_2087_CGC21 CGCFAM_07759 Yes 5 1
Top CAZyme Families