Cluster: HRGMv2_2087_CGC11
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate: alpha-glucan
- Genome ID: HRGMv2_2087
- CGC Family ID: CGCFAM_00117
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2087_3 | HRGMv2_2087_3_45 | 41935 | 44133 | - | 1.B.52.2.1 |
| CAZyme | HRGMv2_2087_3 | HRGMv2_2087_3_46 | 44246 | 45832 | - | GH13_36 |
| TC | HRGMv2_2087_3 | HRGMv2_2087_3_47 | 45903 | 46790 | - | 3.A.1.1.27 |
| TC | HRGMv2_2087_3 | HRGMv2_2087_3_48 | 46790 | 48163 | - | 3.A.1.1.27 |
| STP | HRGMv2_2087_3 | HRGMv2_2087_3_49 | 48283 | 49581 | - | SBP_bac_1 |
| CAZyme | HRGMv2_2087_3 | HRGMv2_2087_3_50 | 49665 | 51161 | - | GH77 |
Gene ID: HRGMv2_2087_3_45
Type: TC
Location: 41935 - 44133 (-)
Type: TC
Location: 41935 - 44133 (-)
Gene ID: HRGMv2_2087_3_46
Type: CAZyme
Location: 44246 - 45832 (-)
Type: CAZyme
Location: 44246 - 45832 (-)
Gene ID: HRGMv2_2087_3_47
Type: TC
Location: 45903 - 46790 (-)
Type: TC
Location: 45903 - 46790 (-)
Gene ID: HRGMv2_2087_3_48
Type: TC
Location: 46790 - 48163 (-)
Type: TC
Location: 46790 - 48163 (-)
Gene ID: HRGMv2_2087_3_49
Type: STP
Location: 48283 - 49581 (-)
Type: STP
Location: 48283 - 49581 (-)
Gene ID: HRGMv2_2087_3_50
Type: CAZyme
Location: 49665 - 51161 (-)
Type: CAZyme
Location: 49665 - 51161 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Agathobacter
Species
Agathobacter faecis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.