Cluster: HRGMv2_2087_CGC25
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2087
- CGC Family ID: CGCFAM_01621
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2087_9 | HRGMv2_2087_9_35 | 40621 | 42354 | - | 1.B.52.2.2 |
| CAZyme | HRGMv2_2087_9 | HRGMv2_2087_9_36 | 42371 | 43852 | - | GH78 |
| CAZyme | HRGMv2_2087_9 | HRGMv2_2087_9_37 | 43871 | 45556 | - | GH3 |
Gene ID: HRGMv2_2087_9_35
Type: TC
Location: 40621 - 42354 (-)
Type: TC
Location: 40621 - 42354 (-)
Gene ID: HRGMv2_2087_9_36
Type: CAZyme
Location: 42371 - 43852 (-)
Type: CAZyme
Location: 42371 - 43852 (-)
Gene ID: HRGMv2_2087_9_37
Type: CAZyme
Location: 43871 - 45556 (-)
Type: CAZyme
Location: 43871 - 45556 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Agathobacter
Species
Agathobacter faecis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_2087_9_37 | vegan > omnivore | 1.08976 | 0.01057 |