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Cluster: HRGMv2_2087_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2087_2 HRGMv2_2087_2_55 56299 58452 + GH25
pfam HRGMv2_2087_2 HRGMv2_2087_2_56 58460 59527 + Amidase_3
pfam HRGMv2_2087_2 HRGMv2_2087_2_57 59765 60448 + Glyco_tran_WecG
TC HRGMv2_2087_2 HRGMv2_2087_2_58 60445 61320 + 2.A.115.1.2
pfam HRGMv2_2087_2 HRGMv2_2087_2_59 61512 62600 + HTH_30 | GGDEF_2
TC HRGMv2_2087_2 HRGMv2_2087_2_60 62618 63304 + 3.A.1.140.1
pfam HRGMv2_2087_2 HRGMv2_2087_2_61 63294 64199 + FtsX | FtsX_ECD
TC HRGMv2_2087_2 HRGMv2_2087_2_62 64285 65574 + 9.B.174.1.1
Gene ID: HRGMv2_2087_2_55
Type: CAZyme
Location: 56299 - 58452 (+)
Gene ID: HRGMv2_2087_2_56
Type: pfam
Location: 58460 - 59527 (+)
Gene ID: HRGMv2_2087_2_57
Type: pfam
Location: 59765 - 60448 (+)
Gene ID: HRGMv2_2087_2_58
Type: TC
Location: 60445 - 61320 (+)
Gene ID: HRGMv2_2087_2_59
Type: pfam
Location: 61512 - 62600 (+)
Gene ID: HRGMv2_2087_2_60
Type: TC
Location: 62618 - 63304 (+)
Gene ID: HRGMv2_2087_2_61
Type: pfam
Location: 63294 - 64199 (+)
Gene ID: HRGMv2_2087_2_62
Type: TC
Location: 64285 - 65574 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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