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Cluster: HRGMv2_2087_CGC24

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2087_8 HRGMv2_2087_8_67 79414 81237 - 8.A.59.2.1
pfam HRGMv2_2087_8 HRGMv2_2087_8_68 81238 82860 - SBP_bac_1
TC HRGMv2_2087_8 HRGMv2_2087_8_69 83527 84363 - 3.A.1.1.20
TC HRGMv2_2087_8 HRGMv2_2087_8_70 84368 85294 - 3.A.1.1.4
STP HRGMv2_2087_8 HRGMv2_2087_8_71 85373 86749 - SBP_bac_1
CAZyme HRGMv2_2087_8 HRGMv2_2087_8_72 86860 88206 - GH30_1
CAZyme HRGMv2_2087_8 HRGMv2_2087_8_73 88225 91311 - GH161
CAZyme HRGMv2_2087_8 HRGMv2_2087_8_74 91308 94019 - GH94
TF HRGMv2_2087_8 HRGMv2_2087_8_75 94099 94839 - HTH_AraC | HTH_AraC
TC HRGMv2_2087_8 HRGMv2_2087_8_76 94840 96642 - 8.A.59.2.1
TC HRGMv2_2087_8 HRGMv2_2087_8_77 96669 97520 - 3.A.1.1.12
TC HRGMv2_2087_8 HRGMv2_2087_8_78 97521 98423 - 3.A.1.1.18
TC HRGMv2_2087_8 HRGMv2_2087_8_79 98491 99828 - 3.A.1.1.21
Gene ID: HRGMv2_2087_8_67
Type: TC
Location: 79414 - 81237 (-)
Gene ID: HRGMv2_2087_8_68
Type: pfam
Location: 81238 - 82860 (-)
Gene ID: HRGMv2_2087_8_69
Type: TC
Location: 83527 - 84363 (-)
Gene ID: HRGMv2_2087_8_70
Type: TC
Location: 84368 - 85294 (-)
Gene ID: HRGMv2_2087_8_71
Type: STP
Location: 85373 - 86749 (-)
Gene ID: HRGMv2_2087_8_72
Type: CAZyme
Location: 86860 - 88206 (-)
Gene ID: HRGMv2_2087_8_73
Type: CAZyme
Location: 88225 - 91311 (-)
Gene ID: HRGMv2_2087_8_74
Type: CAZyme
Location: 91308 - 94019 (-)
Gene ID: HRGMv2_2087_8_75
Type: TF
Location: 94099 - 94839 (-)
Gene ID: HRGMv2_2087_8_76
Type: TC
Location: 94840 - 96642 (-)
Gene ID: HRGMv2_2087_8_77
Type: TC
Location: 96669 - 97520 (-)
Gene ID: HRGMv2_2087_8_78
Type: TC
Location: 97521 - 98423 (-)
Gene ID: HRGMv2_2087_8_79
Type: TC
Location: 98491 - 99828 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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