Cluster: HRGMv2_2087_CGC22
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2087
- CGC Family ID: CGCFAM_00054
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2087_7 | HRGMv2_2087_7_116 | 113288 | 115642 | - | GH36 |
| TC | HRGMv2_2087_7 | HRGMv2_2087_7_117 | 115660 | 117036 | - | 2.A.2.1.1 |
| CAZyme | HRGMv2_2087_7 | HRGMv2_2087_7_118 | 117049 | 119436 | - | GH2 |
| STP | HRGMv2_2087_7 | HRGMv2_2087_7_119 | 119461 | 120030 | - | TetR_N |
| pfam | HRGMv2_2087_7 | HRGMv2_2087_7_120 | 120171 | 121529 | - | MatE | MatE | MurJ |
| TC | HRGMv2_2087_7 | HRGMv2_2087_7_121 | 121585 | 122715 | - | 9.B.34.1.3 |
Gene ID: HRGMv2_2087_7_116
Type: CAZyme
Location: 113288 - 115642 (-)
Type: CAZyme
Location: 113288 - 115642 (-)
Gene ID: HRGMv2_2087_7_117
Type: TC
Location: 115660 - 117036 (-)
Type: TC
Location: 115660 - 117036 (-)
Gene ID: HRGMv2_2087_7_118
Type: CAZyme
Location: 117049 - 119436 (-)
Type: CAZyme
Location: 117049 - 119436 (-)
Gene ID: HRGMv2_2087_7_119
Type: STP
Location: 119461 - 120030 (-)
Type: STP
Location: 119461 - 120030 (-)
Gene ID: HRGMv2_2087_7_120
Type: pfam
Location: 120171 - 121529 (-)
Type: pfam
Location: 120171 - 121529 (-)
Gene ID: HRGMv2_2087_7_121
Type: TC
Location: 121585 - 122715 (-)
Type: TC
Location: 121585 - 122715 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Agathobacter
Species
Agathobacter faecis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.