Cluster: HRGMv2_2087_CGC17
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate: fructan
- Genome ID: HRGMv2_2087
- CGC Family ID: CGCFAM_00481
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2087_4 | HRGMv2_2087_4_108 | 123124 | 124419 | - | 1.B.52.2.1 |
| TF | HRGMv2_2087_4 | HRGMv2_2087_4_109 | 125255 | 126094 | - | HTH_AraC | HTH_AraC |
| STP | HRGMv2_2087_4 | HRGMv2_2087_4_110 | 126229 | 126723 | + | PfkB |
| CAZyme | HRGMv2_2087_4 | HRGMv2_2087_4_111 | 126879 | 128444 | + | GH32 |
Gene ID: HRGMv2_2087_4_108
Type: TC
Location: 123124 - 124419 (-)
Type: TC
Location: 123124 - 124419 (-)
Gene ID: HRGMv2_2087_4_109
Type: TF
Location: 125255 - 126094 (-)
Type: TF
Location: 125255 - 126094 (-)
Gene ID: HRGMv2_2087_4_110
Type: STP
Location: 126229 - 126723 (+)
Type: STP
Location: 126229 - 126723 (+)
Gene ID: HRGMv2_2087_4_111
Type: CAZyme
Location: 126879 - 128444 (+)
Type: CAZyme
Location: 126879 - 128444 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Agathobacter
Species
Agathobacter faecis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.