Cluster: HRGMv2_2087_CGC21
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2087
- CGC Family ID: CGCFAM_07759
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2087_7 | HRGMv2_2087_7_94 | 86463 | 87458 | - | 1.A.33.1.5 |
| pfam | HRGMv2_2087_7 | HRGMv2_2087_7_95 | 87677 | 90523 | - | UvrA_DNA-bind | UvrA_inter |
| pfam | HRGMv2_2087_7 | HRGMv2_2087_7_96 | 90543 | 92528 | - | Helicase_C | UVR | ResIII | UvrB | UvrB_inter |
| CAZyme | HRGMv2_2087_7 | HRGMv2_2087_7_97 | 92747 | 93757 | + | CE4 |
| TC | HRGMv2_2087_7 | HRGMv2_2087_7_98 | 93834 | 96407 | - | 3.A.5.1.3 |
Gene ID: HRGMv2_2087_7_94
Type: TC
Location: 86463 - 87458 (-)
Type: TC
Location: 86463 - 87458 (-)
Gene ID: HRGMv2_2087_7_95
Type: pfam
Location: 87677 - 90523 (-)
Type: pfam
Location: 87677 - 90523 (-)
Gene ID: HRGMv2_2087_7_96
Type: pfam
Location: 90543 - 92528 (-)
Type: pfam
Location: 90543 - 92528 (-)
Gene ID: HRGMv2_2087_7_97
Type: CAZyme
Location: 92747 - 93757 (+)
Type: CAZyme
Location: 92747 - 93757 (+)
Gene ID: HRGMv2_2087_7_98
Type: TC
Location: 93834 - 96407 (-)
Type: TC
Location: 93834 - 96407 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Agathobacter
Species
Agathobacter faecis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.