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Genome Details

Selected Rep_genome_ID: HRGMv2_2046
Total Genomes Found: 8
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Lachnospirales
→
Family
Lachnospiraceae
→
Genus
Limivivens
→
Species
Limivivens faecihominis
Genomes Table
Genome ID Genome Length Completeness Contamination Country Continent Source
C82.bin_10 3,462,473 98.42% 0.21% China(Inner Mongolia) Asia IMGG
CGMR050297 2,986,327 95.57% 0.06% China Asia CGMR
HRGMv2_2046 3,382,352 99.36% 0% South Korea Asia HRGM
KY060_76 2,901,089 94% 1.96% NA Africa H3AfricaPhase2
MGYG000003335 3,295,822 99.68% 1.32% China Asia UHGG
REFINED_METABAT215_TOP10_CONTIGS_1500_ASSEMBLY_K77_MERGED__Hadza_MoBio_hadza-E-H_O_23_1813.75 3,547,200 98.73% 0.21% NA Africa Hadza
SPMP11_bin.54 3,646,188 90.12% 3.59% Singapore Asia SPMP
SPMP97_bin.22 3,134,016 94.46% 0.21% Singapore Asia SPMP
Analysis Charts
CGCs
Gene Cluster ID Family Name In Labeled Family Gene Count CAZyme Count Substrate
HRGMv2_2046_CGC21 CGCFAM_00009 Yes 14 6
HRGMv2_2046_CGC47 CGCFAM_00010 Yes 8 1 alpha-glucan
HRGMv2_2046_CGC42 CGCFAM_00011 Yes 7 4
HRGMv2_2046_CGC16 CGCFAM_00021 Yes 4 1
HRGMv2_2046_CGC27 CGCFAM_00086 Yes 4 1
HRGMv2_2046_CGC5 CGCFAM_00207 Yes 7 2
HRGMv2_2046_CGC23 CGCFAM_00208 Yes 6 3
HRGMv2_2046_CGC6 CGCFAM_00216 Yes 7 2
HRGMv2_2046_CGC26 CGCFAM_00228 Yes 8 3
HRGMv2_2046_CGC19 CGCFAM_00338 Yes 3 1
HRGMv2_2046_CGC62 CGCFAM_00366 Yes 3 1
HRGMv2_2046_CGC60 CGCFAM_00422 Yes 5 3
HRGMv2_2046_CGC33 CGCFAM_00586 Yes 8 3
HRGMv2_2046_CGC38 CGCFAM_00653 Yes 5 3
HRGMv2_2046_CGC41 CGCFAM_01087 Yes 10 5
HRGMv2_2046_CGC14 CGCFAM_01164 Yes 7 2
HRGMv2_2046_CGC55 CGCFAM_01422 Yes 4 1
HRGMv2_2046_CGC61 CGCFAM_01633 Yes 3 2
HRGMv2_2046_CGC29 CGCFAM_01924 Yes 13 7
HRGMv2_2046_CGC53 CGCFAM_02101 Yes 10 2
HRGMv2_2046_CGC15 CGCFAM_02421 Yes 11 3
HRGMv2_2046_CGC31 CGCFAM_02572 Yes 3 1
HRGMv2_2046_CGC51 CGCFAM_02572 Yes 5 3
HRGMv2_2046_CGC18 CGCFAM_05550 Yes 8 4
HRGMv2_2046_CGC34 CGCFAM_05776 Yes 5 1
Top CAZyme Families