Cluster: HRGMv2_2046_CGC34
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2046
- CGC Family ID: CGCFAM_05776
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2046_22 | HRGMv2_2046_22_30 | 27690 | 29897 | - | 3.A.7.7.1 |
| TC | HRGMv2_2046_22 | HRGMv2_2046_22_31 | 29901 | 31085 | - | 8.A.59.4.2 |
| pfam | HRGMv2_2046_22 | HRGMv2_2046_22_32 | 31098 | 31484 | - | Trns_repr_metal |
| TF | HRGMv2_2046_22 | HRGMv2_2046_22_33 | 31726 | 32094 | + | Fe_dep_repress |
| CAZyme | HRGMv2_2046_22 | HRGMv2_2046_22_34 | 32144 | 34030 | - | GH129 |
Gene ID: HRGMv2_2046_22_30
Type: TC
Location: 27690 - 29897 (-)
Type: TC
Location: 27690 - 29897 (-)
Gene ID: HRGMv2_2046_22_31
Type: TC
Location: 29901 - 31085 (-)
Type: TC
Location: 29901 - 31085 (-)
Gene ID: HRGMv2_2046_22_32
Type: pfam
Location: 31098 - 31484 (-)
Type: pfam
Location: 31098 - 31484 (-)
Gene ID: HRGMv2_2046_22_33
Type: TF
Location: 31726 - 32094 (+)
Type: TF
Location: 31726 - 32094 (+)
Gene ID: HRGMv2_2046_22_34
Type: CAZyme
Location: 32144 - 34030 (-)
Type: CAZyme
Location: 32144 - 34030 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Limivivens
Species
Limivivens faecihominis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.