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Cluster: HRGMv2_2046_CGC29

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2046_16 HRGMv2_2046_16_3 1428 2807 + 2.A.66.1.32
CAZyme HRGMv2_2046_16 HRGMv2_2046_16_4 3043 5451 + GH3
CAZyme HRGMv2_2046_16 HRGMv2_2046_16_5 5955 6944 + GH130_2
CAZyme HRGMv2_2046_16 HRGMv2_2046_16_6 7190 10327 + GH38
TF HRGMv2_2046_16 HRGMv2_2046_16_7 10404 11426 - LacI
CAZyme HRGMv2_2046_16 HRGMv2_2046_16_8 11423 12499 - CBM9
CAZyme HRGMv2_2046_16 HRGMv2_2046_16_9 12709 14973 + GH3
TC HRGMv2_2046_16 HRGMv2_2046_16_10 15429 16364 + 3.A.1.1.10
TC HRGMv2_2046_16 HRGMv2_2046_16_11 16378 17307 + 3.A.1.1.29
STP HRGMv2_2046_16 HRGMv2_2046_16_12 17430 19106 + SBP_bac_1
CAZyme HRGMv2_2046_16 HRGMv2_2046_16_13 19202 20572 + GH29
CAZyme HRGMv2_2046_16 HRGMv2_2046_16_14 20659 21672 + GH18
TC HRGMv2_2046_16 HRGMv2_2046_16_15 21948 23324 - 2.A.66.1.33
Gene ID: HRGMv2_2046_16_3
Type: TC
Location: 1428 - 2807 (+)
Gene ID: HRGMv2_2046_16_4
Type: CAZyme
Location: 3043 - 5451 (+)
Gene ID: HRGMv2_2046_16_5
Type: CAZyme
Location: 5955 - 6944 (+)
Gene ID: HRGMv2_2046_16_6
Type: CAZyme
Location: 7190 - 10327 (+)
Gene ID: HRGMv2_2046_16_7
Type: TF
Location: 10404 - 11426 (-)
Gene ID: HRGMv2_2046_16_8
Type: CAZyme
Location: 11423 - 12499 (-)
Gene ID: HRGMv2_2046_16_9
Type: CAZyme
Location: 12709 - 14973 (+)
Gene ID: HRGMv2_2046_16_10
Type: TC
Location: 15429 - 16364 (+)
Gene ID: HRGMv2_2046_16_11
Type: TC
Location: 16378 - 17307 (+)
Gene ID: HRGMv2_2046_16_12
Type: STP
Location: 17430 - 19106 (+)
Gene ID: HRGMv2_2046_16_13
Type: CAZyme
Location: 19202 - 20572 (+)
Gene ID: HRGMv2_2046_16_14
Type: CAZyme
Location: 20659 - 21672 (+)
Gene ID: HRGMv2_2046_16_15
Type: TC
Location: 21948 - 23324 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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