Cluster: HRGMv2_2046_CGC31
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2046
- CGC Family ID: CGCFAM_02572
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2046_19 | HRGMv2_2046_19_4 | 4809 | 5735 | + | 3.A.1.1.25 |
| TC | HRGMv2_2046_19 | HRGMv2_2046_19_5 | 5747 | 6649 | + | 3.A.1.1.29 |
| CAZyme | HRGMv2_2046_19 | HRGMv2_2046_19_6 | 6662 | 9340 | + | GH106 |
Gene ID: HRGMv2_2046_19_4
Type: TC
Location: 4809 - 5735 (+)
Type: TC
Location: 4809 - 5735 (+)
Gene ID: HRGMv2_2046_19_5
Type: TC
Location: 5747 - 6649 (+)
Type: TC
Location: 5747 - 6649 (+)
Gene ID: HRGMv2_2046_19_6
Type: CAZyme
Location: 6662 - 9340 (+)
Type: CAZyme
Location: 6662 - 9340 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Limivivens
Species
Limivivens faecihominis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.