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Cluster: HRGMv2_2046_CGC33

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2046_19 HRGMv2_2046_19_39 46580 48766 + GH36
TF HRGMv2_2046_19 HRGMv2_2046_19_40 48851 49870 + LacI
NULL(UNKNOWN) HRGMv2_2046_19 HRGMv2_2046_19_41 50247 50474 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_2046_19 HRGMv2_2046_19_42 50513 51145 + 3.A.1.1.34
NULL(UNKNOWN) HRGMv2_2046_19 HRGMv2_2046_19_43 51175 51339 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_2046_19 HRGMv2_2046_19_44 51339 51851 + GH130_2
pfam HRGMv2_2046_19 HRGMv2_2046_19_45 51861 53039 + GlcNAc_2-epim
CAZyme HRGMv2_2046_19 HRGMv2_2046_19_46 53029 54204 + GH130_1
Gene ID: HRGMv2_2046_19_39
Type: CAZyme
Location: 46580 - 48766 (+)
Gene ID: HRGMv2_2046_19_40
Type: TF
Location: 48851 - 49870 (+)
Gene ID: HRGMv2_2046_19_41
Type:
Location: 50247 - 50474 (+)
Gene ID: HRGMv2_2046_19_42
Type: TC
Location: 50513 - 51145 (+)
Gene ID: HRGMv2_2046_19_43
Type:
Location: 51175 - 51339 (+)
Gene ID: HRGMv2_2046_19_44
Type: CAZyme
Location: 51339 - 51851 (+)
Gene ID: HRGMv2_2046_19_45
Type: pfam
Location: 51861 - 53039 (+)
Gene ID: HRGMv2_2046_19_46
Type: CAZyme
Location: 53029 - 54204 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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