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Cluster: HRGMv2_2046_CGC47

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2046_40 HRGMv2_2046_40_9 6310 7116 - 3.A.1.25.4
TC HRGMv2_2046_40 HRGMv2_2046_40_10 7113 8015 - 3.A.1.26.7
TC HRGMv2_2046_40 HRGMv2_2046_40_11 7991 8851 - 3.A.1.26.7
TF HRGMv2_2046_40 HRGMv2_2046_40_12 9114 10145 - LacI
CAZyme HRGMv2_2046_40 HRGMv2_2046_40_13 10279 11763 - GH77
TC HRGMv2_2046_40 HRGMv2_2046_40_14 11849 12688 - 3.A.1.1.45
TC HRGMv2_2046_40 HRGMv2_2046_40_15 12688 13530 - 3.A.1.1.45
TC HRGMv2_2046_40 HRGMv2_2046_40_16 13643 15076 - 3.A.1.1.45
Gene ID: HRGMv2_2046_40_9
Type: TC
Location: 6310 - 7116 (-)
Gene ID: HRGMv2_2046_40_10
Type: TC
Location: 7113 - 8015 (-)
Gene ID: HRGMv2_2046_40_11
Type: TC
Location: 7991 - 8851 (-)
Gene ID: HRGMv2_2046_40_12
Type: TF
Location: 9114 - 10145 (-)
Gene ID: HRGMv2_2046_40_13
Type: CAZyme
Location: 10279 - 11763 (-)
Gene ID: HRGMv2_2046_40_14
Type: TC
Location: 11849 - 12688 (-)
Gene ID: HRGMv2_2046_40_15
Type: TC
Location: 12688 - 13530 (-)
Gene ID: HRGMv2_2046_40_16
Type: TC
Location: 13643 - 15076 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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