Genome Details
Selected Rep_genome_ID: HRGMv2_2046
Total Genomes Found: 8
Total Genomes Found: 8
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Limivivens
Species
Limivivens faecihominis
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| C82.bin_10 | 3,462,473 | 98.42% | 0.21% | China(Inner Mongolia) | Asia | IMGG |
| CGMR050297 | 2,986,327 | 95.57% | 0.06% | China | Asia | CGMR |
| HRGMv2_2046 | 3,382,352 | 99.36% | 0% | South Korea | Asia | HRGM |
| KY060_76 | 2,901,089 | 94% | 1.96% | NA | Africa | H3AfricaPhase2 |
| MGYG000003335 | 3,295,822 | 99.68% | 1.32% | China | Asia | UHGG |
| REFINED_METABAT215_TOP10_CONTIGS_1500_ASSEMBLY_K77_MERGED__Hadza_MoBio_hadza-E-H_O_23_1813.75 | 3,547,200 | 98.73% | 0.21% | NA | Africa | Hadza |
| SPMP11_bin.54 | 3,646,188 | 90.12% | 3.59% | Singapore | Asia | SPMP |
| SPMP97_bin.22 | 3,134,016 | 94.46% | 0.21% | Singapore | Asia | SPMP |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| HRGMv2_2046_CGC39 | CGCFAM_08099 | Yes | 6 | 2 | |
| HRGMv2_2046_CGC52 | CGCFAM_09017 | Yes | 8 | 1 | |
| HRGMv2_2046_CGC24 | CGCFAM_09018 | Yes | 6 | 2 | |
| HRGMv2_2046_CGC37 | CGCFAM_09019 | Yes | 7 | 1 | |
| HRGMv2_2046_CGC22 | CGCFAM_09942 | Yes | 4 | 1 |
Top CAZyme Families