Cluster: HRGMv2_2046_CGC22
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2046
- CGC Family ID: CGCFAM_09942
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2046_10 | HRGMv2_2046_10_35 | 45283 | 45930 | - | 3.A.7.13.2 |
| pfam | HRGMv2_2046_10 | HRGMv2_2046_10_36 | 46074 | 46925 | + | DAP_epimerase | DAP_epimerase |
| peptidase | HRGMv2_2046_10 | HRGMv2_2046_10_37 | 46944 | 47756 | + | S09.UPW |
| CAZyme | HRGMv2_2046_10 | HRGMv2_2046_10_38 | 47771 | 49903 | + | GH3 |
Gene ID: HRGMv2_2046_10_35
Type: TC
Location: 45283 - 45930 (-)
Type: TC
Location: 45283 - 45930 (-)
Gene ID: HRGMv2_2046_10_36
Type: pfam
Location: 46074 - 46925 (+)
Type: pfam
Location: 46074 - 46925 (+)
Gene ID: HRGMv2_2046_10_37
Type: peptidase
Location: 46944 - 47756 (+)
Type: peptidase
Location: 46944 - 47756 (+)
Gene ID: HRGMv2_2046_10_38
Type: CAZyme
Location: 47771 - 49903 (+)
Type: CAZyme
Location: 47771 - 49903 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Limivivens
Species
Limivivens faecihominis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.