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Cluster: HRGMv2_2046_CGC37

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2046_24 HRGMv2_2046_24_39 42741 43304 + 2.A.51.1.1
TC HRGMv2_2046_24 HRGMv2_2046_24_40 43301 43870 + 2.A.51.1.6
NULL(UNKNOWN) HRGMv2_2046_24 HRGMv2_2046_24_41 43981 44178 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_2046_24 HRGMv2_2046_24_42 44178 45314 - GH27
pfam HRGMv2_2046_24 HRGMv2_2046_24_43 45467 46777 - ThiC_Rad_SAM
NULL(UNKNOWN) HRGMv2_2046_24 HRGMv2_2046_24_44 46948 47052 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_2046_24 HRGMv2_2046_24_45 47024 47533 - 3.A.1.26.5
Gene ID: HRGMv2_2046_24_39
Type: TC
Location: 42741 - 43304 (+)
Gene ID: HRGMv2_2046_24_40
Type: TC
Location: 43301 - 43870 (+)
Gene ID: HRGMv2_2046_24_41
Type:
Location: 43981 - 44178 (-)
Gene ID: HRGMv2_2046_24_42
Type: CAZyme
Location: 44178 - 45314 (-)
Gene ID: HRGMv2_2046_24_43
Type: pfam
Location: 45467 - 46777 (-)
Gene ID: HRGMv2_2046_24_44
Type:
Location: 46948 - 47052 (+)
Gene ID: HRGMv2_2046_24_45
Type: TC
Location: 47024 - 47533 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_2046_24_45 vegan > omnivore 1.03358 0.01226

🧭 Explore Read Mapping of CGC

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