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Cluster: HRGMv2_2046_CGC18

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2046_9 HRGMv2_2046_9_35 35682 38789 - GH38
TF HRGMv2_2046_9 HRGMv2_2046_9_36 39047 40156 + GntR
CAZyme HRGMv2_2046_9 HRGMv2_2046_9_37 40212 41324 - GH76
CAZyme HRGMv2_2046_9 HRGMv2_2046_9_38 41305 43773 - GH38
CAZyme HRGMv2_2046_9 HRGMv2_2046_9_39 43790 44809 - GH76
TC HRGMv2_2046_9 HRGMv2_2046_9_40 44883 46148 - 3.A.1.1.2
TC HRGMv2_2046_9 HRGMv2_2046_9_41 46243 47118 - 3.A.1.1.20
TC HRGMv2_2046_9 HRGMv2_2046_9_42 47135 48031 - 3.A.1.1.20
Gene ID: HRGMv2_2046_9_35
Type: CAZyme
Location: 35682 - 38789 (-)
Gene ID: HRGMv2_2046_9_36
Type: TF
Location: 39047 - 40156 (+)
Gene ID: HRGMv2_2046_9_37
Type: CAZyme
Location: 40212 - 41324 (-)
Gene ID: HRGMv2_2046_9_38
Type: CAZyme
Location: 41305 - 43773 (-)
Gene ID: HRGMv2_2046_9_39
Type: CAZyme
Location: 43790 - 44809 (-)
Gene ID: HRGMv2_2046_9_40
Type: TC
Location: 44883 - 46148 (-)
Gene ID: HRGMv2_2046_9_41
Type: TC
Location: 46243 - 47118 (-)
Gene ID: HRGMv2_2046_9_42
Type: TC
Location: 47135 - 48031 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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