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Cluster: HRGMv2_2046_CGC26

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2046_14 HRGMv2_2046_14_2 369 1298 + 3.A.1.1.10
TC HRGMv2_2046_14 HRGMv2_2046_14_3 1317 2225 + 3.A.1.1.29
STP HRGMv2_2046_14 HRGMv2_2046_14_4 2308 3987 + SBP_bac_1
CAZyme HRGMv2_2046_14 HRGMv2_2046_14_5 4083 5789 + GH78
CAZyme HRGMv2_2046_14 HRGMv2_2046_14_6 5817 8393 + GH106
CAZyme HRGMv2_2046_14 HRGMv2_2046_14_7 8452 11574 - GH106
TF HRGMv2_2046_14 HRGMv2_2046_14_8 11724 12722 + HTH_AraC | HTH_AraC
TC HRGMv2_2046_14 HRGMv2_2046_14_9 12876 14228 + 2.A.66.1.13
Gene ID: HRGMv2_2046_14_2
Type: TC
Location: 369 - 1298 (+)
Gene ID: HRGMv2_2046_14_3
Type: TC
Location: 1317 - 2225 (+)
Gene ID: HRGMv2_2046_14_4
Type: STP
Location: 2308 - 3987 (+)
Gene ID: HRGMv2_2046_14_5
Type: CAZyme
Location: 4083 - 5789 (+)
Gene ID: HRGMv2_2046_14_6
Type: CAZyme
Location: 5817 - 8393 (+)
Gene ID: HRGMv2_2046_14_7
Type: CAZyme
Location: 8452 - 11574 (-)
Gene ID: HRGMv2_2046_14_8
Type: TF
Location: 11724 - 12722 (+)
Gene ID: HRGMv2_2046_14_9
Type: TC
Location: 12876 - 14228 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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