Cluster: HRGMv2_2046_CGC60
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_2046
- CGC Family ID: CGCFAM_00422
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2046_71 | HRGMv2_2046_71_1 | 194 | 2200 | - | GH36 |
| CAZyme | HRGMv2_2046_71 | HRGMv2_2046_71_2 | 2193 | 4460 | - | GH3 |
| CAZyme | HRGMv2_2046_71 | HRGMv2_2046_71_3 | 4462 | 6144 | - | GH13_31 |
| TC | HRGMv2_2046_71 | HRGMv2_2046_71_4 | 6218 | 7063 | - | 3.A.1.1.45 |
| TC | HRGMv2_2046_71 | HRGMv2_2046_71_5 | 7063 | 8004 | - | 3.A.1.1.45 |
Gene ID: HRGMv2_2046_71_1
Type: CAZyme
Location: 194 - 2200 (-)
Type: CAZyme
Location: 194 - 2200 (-)
Gene ID: HRGMv2_2046_71_2
Type: CAZyme
Location: 2193 - 4460 (-)
Type: CAZyme
Location: 2193 - 4460 (-)
Gene ID: HRGMv2_2046_71_3
Type: CAZyme
Location: 4462 - 6144 (-)
Type: CAZyme
Location: 4462 - 6144 (-)
Gene ID: HRGMv2_2046_71_4
Type: TC
Location: 6218 - 7063 (-)
Type: TC
Location: 6218 - 7063 (-)
Gene ID: HRGMv2_2046_71_5
Type: TC
Location: 7063 - 8004 (-)
Type: TC
Location: 7063 - 8004 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Limivivens
Species
Limivivens faecihominis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.