dbCAN Logo

Cluster: HRGMv2_2046_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2046_8 HRGMv2_2046_8_41 46691 47509 - 3.A.1.1.30
TC HRGMv2_2046_8 HRGMv2_2046_8_42 47517 48461 - 3.A.1.1.28
STP HRGMv2_2046_8 HRGMv2_2046_8_43 48490 49746 - SBP_bac_1
CAZyme HRGMv2_2046_8 HRGMv2_2046_8_44 50038 51042 - GH18
CAZyme HRGMv2_2046_8 HRGMv2_2046_8_45 51063 52352 - GH29
NULL(UNKNOWN) HRGMv2_2046_8 HRGMv2_2046_8_46 52373 54712 - NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) HRGMv2_2046_8 HRGMv2_2046_8_47 54943 56541 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_2046_8 HRGMv2_2046_8_48 56690 57598 - 3.A.1.1.10
TC HRGMv2_2046_8 HRGMv2_2046_8_49 57615 58547 - 3.A.1.1.10
pfam HRGMv2_2046_8 HRGMv2_2046_8_50 58826 59467 - NMN_transporter
CAZyme HRGMv2_2046_8 HRGMv2_2046_8_51 59464 62550 - GH2
Gene ID: HRGMv2_2046_8_41
Type: TC
Location: 46691 - 47509 (-)
Gene ID: HRGMv2_2046_8_42
Type: TC
Location: 47517 - 48461 (-)
Gene ID: HRGMv2_2046_8_43
Type: STP
Location: 48490 - 49746 (-)
Gene ID: HRGMv2_2046_8_44
Type: CAZyme
Location: 50038 - 51042 (-)
Gene ID: HRGMv2_2046_8_45
Type: CAZyme
Location: 51063 - 52352 (-)
Gene ID: HRGMv2_2046_8_46
Type:
Location: 52373 - 54712 (-)
Gene ID: HRGMv2_2046_8_47
Type:
Location: 54943 - 56541 (-)
Gene ID: HRGMv2_2046_8_48
Type: TC
Location: 56690 - 57598 (-)
Gene ID: HRGMv2_2046_8_49
Type: TC
Location: 57615 - 58547 (-)
Gene ID: HRGMv2_2046_8_50
Type: pfam
Location: 58826 - 59467 (-)
Gene ID: HRGMv2_2046_8_51
Type: CAZyme
Location: 59464 - 62550 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_2046_8_41 vegan > omnivore 1.71386 0.01226
HRGMv2_2046_8_41 vegetarian > omnivore 1.82524 0.02914

🧭 Explore Read Mapping of CGC

← Back to Cluster List