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PROTEIN: HRGMv2_2046_8_47

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Protein File & Metadata
Download PDB File
Source:
HRGMv2_2046_8_47.pdb
Genome ID:
HRGMv2_2046
Protein ID:
HRGMv2_2046_8_47

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Detailed structural information will appear here after analysis...

Protein Sequence 
MKNKKLWAAL   LVSAMTMTAA   MGTGVSASET   EGTSGEREKD   GIMYTEGLPI   VDDGDYTFSL 60
FVDGGVETDE   PTMMPILKEQ   TGVNVDLQMF   AYEIATEKYS   LSLSSGDYAD   CIGGWCLSSK 120
DILNYGVDMS   VFVPLEEYFE   KYCPKISEIL   ELEGVRETMT   APDGHIYSIP   YVIEAPEVDF 180
NPYINQKWLE   NVGMEMPTTT   EELREVLRAF   KEQDANGNGD   PNDEIPLSGS   PENLHLGYMA 240
GYFGCSIDDN   GFTMDGDQLV   FGATSEAYKK   GMEYLASLYA   EGLIDPELFT   QDSATWKSKG 300
GQDQYGVCIM   YGYGDIVPQT   PTEMPDWTPL   PVLKSEGVEN   PVWLKNTYGT   TVLKNQVVIT 360
DNAEHPEIIC   RWWDNFFELD   NAVMSQHGVL   DEVVFKQEDG   SYTKADVTTL   SEDVQKANDW 420
GNLWPQSLPK   YIPAGFKIKE   EVEPIYNETE   YRDSLYEPYL   TEKCVPDEWP   DLENSEEIAE 480
LEASIKDYIT   QCQAKWVAGQ   SDINADWDGY   LEQLDKLGLD   QYLEYKGAVK   AE 532
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-A0A133CZN8-F1-model_v4 1 529 8 496 0.7232 0.7828
AF-A0A133D019-F1-model_v4 6 529 25 479 0.6299 0.7178
AF-A0A133CSA1-F1-model_v4 34 521 18 427 0.6099 0.7195
AF-K0EWS5-F1-model_v4 54 532 24 457 0.6053 0.7
AF-A0A0H3GKJ8-F1-model_v4 35 525 17 406 0.5859 0.7084
AF-A0A132ZDH4-F1-model_v4 52 519 26 427 0.5819 0.6987
AF-Q2G1E9-F1-model_v4 41 526 39 414 0.5807 0.734
AF-A0A133CDW9-F1-model_v4 54 527 41 444 0.575 0.6989
AF-P71894-F1-model_v4 53 525 34 439 0.5677 0.685
AF-A0A133CKQ7-F1-model_v4 55 526 37 419 0.5669 0.7022
Download Full AFDB Results
Structural Homologs - CAZyme3D-Whole
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
A0A0M1Q963 GH43_11 41 530 39 501 0.6453 0.7363
AF-K8EJG7-F1-model_v4 CBM50 , CE4 54 527 31 416 0.5493 0.675
A0A9Q8PNJ5 GH4 1 526 112 866 0.4575 0.5783
AF-A0A7U1BNH7-F1-model_v4 GH10 53 529 25 742 0.4496 0.5841
Download Full CAZyme3D-Whole Results
Structural Homologs - CAZyme-ID50
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
A0A0M1Q963 GH43_11 41 530 39 501 0.6453 0.7363
K8EJG7 CBM50 , CE4 54 527 31 416 0.5493 0.675
A0A9Q8PNJ5 GH4 1 526 112 866 0.4575 0.5783
A0A7U1BNH7 GH10 53 529 25 742 0.4496 0.5841
Download Full CAZyme-ID50 Results
Structural Homologs - PDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
5g5y-assembly1.cif.gz_A 53 529 1 485 0.801 0.8714
6fth-assembly1.cif.gz_A 54 530 1 490 0.7625 0.834
3omb-assembly1.cif.gz_A 53 529 4 497 0.7617 0.839
5xs8-assembly1.cif.gz_A 57 529 1 473 0.6883 0.7493
5g62-assembly2.cif.gz_B 57 529 1 483 0.6819 0.7535
4tqu-assembly1.cif.gz_Q 47 529 2 483 0.6711 0.7322
5h6u-assembly1.cif.gz_A 48 529 1 480 0.6705 0.7311
6jhx-assembly2.cif.gz_B 47 529 2 478 0.6663 0.7277
3vlw-assembly2.cif.gz_B 48 529 1 484 0.6645 0.7245
5suo-assembly1.cif.gz_A 54 530 1 444 0.6443 0.7277
Download Full PDB Results
Structural Homologs - SwissProt
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-A0A0H2URD6-F1-model_v4 40 529 36 529 0.7641 0.846
AF-Q795R2-F1-model_v4 40 529 32 493 0.7337 0.8309
AF-P37966-F1-model_v4 42 530 29 498 0.7031 0.7884
AF-O31518-F1-model_v4 32 525 21 427 0.6279 0.7449
AF-Q2YKZ9-F1-model_v4 54 525 21 411 0.5948 0.7172
AF-Q8FVS7-F1-model_v4 54 525 22 411 0.5945 0.7186
AF-Q578M8-F1-model_v4 54 525 22 411 0.5934 0.7171
AF-P76042-F1-model_v4 42 525 22 430 0.5909 0.7015
AF-O06989-F1-model_v4 55 527 33 416 0.5675 0.6996
AF-O07009-F1-model_v4 39 527 27 419 0.5649 0.6871
Download Full SwissProt Results